Detailed information NTG0229658

Bioinformatically predicted

Overview

• Name: fimT
• Type: Machinery gene
• Locus tag: CA921_RS03500
• Genome accession: NZ_CP021283
• Coordinates: 729068..729775 (-)
• Length: 235 a.a.
• NCBI ID: WP_080449804.1
• Uniprot ID: -
• Organism: Legionella pneumophila subsp. pneumophila strain Allentown
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 724068..734775

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CA921_RS03485	-	726943..727455 (-)	513	WP_038837643.1	pilus assembly PilX family protein	-
CA921_RS03490	-	727452..728519 (-)	1068	WP_061692681.1	PilW family protein	-
CA921_RS03495	pilV	728516..729055 (-)	540	WP_027266062.1	type IV pilus modification protein PilV	-
CA921_RS03500	fimT	729068..729775 (-)	708	WP_080449804.1	GspH/FimT family pseudopilin	Machinery gene
CA921_RS03505	-	729988..730848 (-)	861	WP_061692682.1	polysaccharide deacetylase family protein	-
CA921_RS03510	-	731023..732372 (-)	1350	WP_080275855.1	lpg0634 family Dot/Icm T4SS effector	-
CA921_RS03515	-	732662..734143 (+)	1482	WP_061692683.1	ArnT family glycosyltransferase	-

Sequence

Protein

• Length: 235 a.a.
• Molecular weight: 24881.51 Da
• Isoelectric Point: 7.5196

>NTDB_id=229658 CA921_RS03500 WP_080449804.1 729068..729775(-) (fimT) [Legionella pneumophila subsp. pneumophila strain Allentown]
MNKVITESQKFTLRNVANMLFCVESSVLPAQSNIAQKIQTKGIMYNDLCKDGFDTEAPLNSNSLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSYQTSVNDPVITSNVSSVIFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP

Nucleotide

• Length: 708 bp

>NTDB_id=229658 CA921_RS03500 WP_080449804.1 729068..729775(-) (fimT) [Legionella pneumophila subsp. pneumophila strain Allentown]
TTGAACAAAGTGATAACGGAATCACAAAAGTTCACTCTGCGCAACGTAGCTAATATGTTATTTTGCGTTGAGAGTAGTGT
ATTGCCCGCACAATCTAATATAGCACAAAAGATACAAACAAAAGGCATAATGTACAATGATCTTTGTAAAGACGGCTTCG
ATACTGAGGCCCCTCTTAACAGCAACTCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATCATCTTAACTCTAATCGTTCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTAGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCAC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAGCACCAACGCTT
TTAAAATCGTACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTATTTTTGACCCACATGGGTT
ATCAACAACCCAAAGCAACTTCACTATGTGTGATAACAGAGGCAATGCGTTTGCTCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGCCAGGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA

Domains

Predicted by InterproScan.

• Type II transport protein GspH (GspH) (106-208)

• Prokaryotic N-terminal methylation motif (N_methyl) (67-88)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
fimT	Legionella pneumophila strain Lp02	97.021	100	0.97