Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   CA929_RS07720 Genome accession   NZ_CP021277
Coordinates   1668810..1669151 (-) Length   113 a.a.
NCBI ID   WP_027226909.1    Uniprot ID   A0A2S6EZB2
Organism   Legionella pneumophila subsp. fraseri strain D-4058     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1663810..1674151
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CA929_RS07705 - 1664911..1666011 (-) 1101 WP_027226912.1 anhydro-N-acetylmuramic acid kinase -
  CA929_RS07710 - 1666114..1667466 (-) 1353 WP_027226911.1 hypothetical protein -
  CA929_RS07715 - 1667966..1668754 (-) 789 WP_027226910.1 TatD family hydrolase -
  CA929_RS07720 pilZ 1668810..1669151 (-) 342 WP_027226909.1 PilZ domain-containing protein Machinery gene
  CA929_RS07725 - 1669279..1670184 (-) 906 WP_027226908.1 DNA polymerase III subunit delta' -
  CA929_RS07730 tmk 1670181..1670819 (-) 639 WP_027226907.1 dTMP kinase -
  CA929_RS07735 mltG 1670819..1671817 (-) 999 WP_027226906.1 endolytic transglycosylase MltG -
  CA929_RS07740 fabF 1671818..1673056 (-) 1239 WP_027226905.1 beta-ketoacyl-ACP synthase II -
  CA929_RS07745 acpP 1673076..1673324 (-) 249 WP_003631752.1 acyl carrier protein -

Sequence

Protein


Download         Length: 113 a.a.        Molecular weight: 12469.49 Da        Isoelectric Point: 8.2421

>NTDB_id=229551 CA929_RS07720 WP_027226909.1 1668810..1669151(-) (pilZ) [Legionella pneumophila subsp. fraseri strain D-4058]
MTEKPQLINCSFPNEASLYIAYMPFVKGGGLFIRTQHVYPLGQSLELSVKLLNENEPYLVAGKVVWITPKGAQGNKPPGV
GIQFTGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=229551 CA929_RS07720 WP_027226909.1 1668810..1669151(-) (pilZ) [Legionella pneumophila subsp. fraseri strain D-4058]
ATGACCGAAAAACCACAGCTTATAAACTGCTCATTTCCCAATGAAGCATCTTTGTATATAGCTTATATGCCTTTTGTGAA
AGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATCCTTTAGGACAATCACTTGAATTATCGGTTAAGTTACTCAATG
AAAATGAACCTTATTTGGTCGCTGGTAAAGTAGTCTGGATTACTCCTAAAGGCGCGCAAGGTAATAAGCCTCCGGGAGTT
GGTATTCAATTTACTGGTGAAAATAGTCGTTATTTATGTAACAAGATAGAAACCTACTTGGCGGGAATGTTAAAATCATG
TCAAGTTACAGATACTATCTAG

Domains

Predicted by InterproScan.

PilZ domain (PilZ)

(9-101)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2S6EZB2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

96.46

100

0.965
  pilZ Legionella pneumophila strain ERS1305867

96.46

100

0.965

Multiple sequence alignment