Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   CA920_RS06915 Genome accession   NZ_CP021269
Coordinates   1504320..1504661 (+) Length   113 a.a.
NCBI ID   WP_014843813.1    Uniprot ID   -
Organism   Legionella pneumophila subsp. pneumophila strain Bellingham     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1499320..1509661
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CA920_RS06890 acpP 1500148..1500396 (+) 249 WP_003631752.1 acyl carrier protein -
  CA920_RS06895 fabF 1500416..1501654 (+) 1239 WP_011946414.1 beta-ketoacyl-ACP synthase II -
  CA920_RS06900 mltG 1501655..1502653 (+) 999 WP_014843810.1 endolytic transglycosylase MltG -
  CA920_RS06905 tmk 1502653..1503291 (+) 639 WP_014843811.1 dTMP kinase -
  CA920_RS06910 - 1503288..1504193 (+) 906 WP_014843812.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  CA920_RS06915 pilZ 1504320..1504661 (+) 342 WP_014843813.1 PilZ domain-containing protein Machinery gene
  CA920_RS06920 - 1504717..1505505 (+) 789 WP_027224933.1 TatD family hydrolase -
  CA920_RS06925 - 1505617..1506717 (+) 1101 WP_027224934.1 anhydro-N-acetylmuramic acid kinase -
  CA920_RS06930 - 1506773..1508065 (+) 1293 WP_027224935.1 MFS transporter -
  CA920_RS15585 - 1508138..1508281 (+) 144 WP_172407120.1 hypothetical protein -

Sequence

Protein


Download         Length: 113 a.a.        Molecular weight: 12535.57 Da        Isoelectric Point: 8.2421

>NTDB_id=229501 CA920_RS06915 WP_014843813.1 1504320..1504661(+) (pilZ) [Legionella pneumophila subsp. pneumophila strain Bellingham]
MTEKPQLINCSFPNEASLYMAYMPFVKGGGLFIRTQHVYSLGQSLELSVKLLNENEPYLVTGKIVWITPKGAQGNKPPGV
GIQFTGENSRYLCNKIETYLAGMLKSCQITDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=229501 CA920_RS06915 WP_014843813.1 1504320..1504661(+) (pilZ) [Legionella pneumophila subsp. pneumophila strain Bellingham]
ATGACCGAAAAACCACAGCTTATAAACTGCTCATTTCCCAATGAAGCATCTTTGTACATGGCTTACATGCCTTTTGTGAA
AGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATTCTCTAGGGCAGTCGCTTGAATTATCTGTTAAATTGCTCAATG
AAAATGAACCATATTTAGTCACTGGTAAAATAGTCTGGATTACTCCTAAAGGTGCACAAGGTAATAAGCCACCGGGAGTT
GGTATTCAATTTACCGGTGAAAACAGTCGTTATCTATGTAACAAGATAGAAACTTATTTGGCAGGAATGCTAAAATCATG
TCAGATTACAGATACTATATAG

Domains

Predicted by InterproScan.

PilZ domain (PilZ)

(8-101)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

99.115

100

0.991
  pilZ Legionella pneumophila strain ERS1305867

99.115

100

0.991

Multiple sequence alignment