Detailed information NTG0229493

Bioinformatically predicted

Overview

• Name: fimT
• Type: Machinery gene
• Locus tag: CA920_RS03270
• Genome accession: NZ_CP021269
• Coordinates: 678602..679309 (-)
• Length: 235 a.a.
• NCBI ID: WP_027224586.1
• Uniprot ID: -
• Organism: Legionella pneumophila subsp. pneumophila strain Bellingham
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 673602..684309

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CA920_RS03255	-	676477..676989 (-)	513	WP_027224583.1	pilus assembly protein	-
CA920_RS03260	-	676986..678053 (-)	1068	WP_027224584.1	PilW family protein	-
CA920_RS03265	pilV	678050..678589 (-)	540	WP_027224585.1	type IV pilus modification protein PilV	-
CA920_RS03270	fimT	678602..679309 (-)	708	WP_027224586.1	GspH/FimT family pseudopilin	Machinery gene
CA920_RS03275	-	679539..680399 (-)	861	WP_027224587.1	polysaccharide deacetylase family protein	-
CA920_RS03280	-	680576..681925 (-)	1350	WP_080031323.1	lpg0634 family Dot/Icm T4SS effector	-
CA920_RS03285	-	682213..683694 (+)	1482	WP_027224588.1	glycosyltransferase family 39 protein	-

Sequence

Protein

• Length: 235 a.a.
• Molecular weight: 25032.68 Da
• Isoelectric Point: 7.5939

>NTDB_id=229493 CA920_RS03270 WP_027224586.1 678602..679309(-) (fimT) [Legionella pneumophila subsp. pneumophila strain Bellingham]
MNKVITESQKFTLHNIANMLFCVERSVLPTQSNIAQKIQTKGIMYNDLCKDSFDTEAPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWNSGWIVVTQPVAGTPTL
LKTHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGSTPGQAVWNNGALNCP

Nucleotide

• Length: 708 bp

>NTDB_id=229493 CA920_RS03270 WP_027224586.1 678602..679309(-) (fimT) [Legionella pneumophila subsp. pneumophila strain Bellingham]
TTGAACAAAGTGATAACGGAATCACAAAAGTTCACTCTGCACAACATAGCAAATATGTTATTTTGCGTGGAGAGAAGTGT
ATTGCCCACACAATCTAATATAGCACAAAAGATACAAACAAAAGGCATAATGTACAATGATCTTTGTAAAGATAGCTTCG
ATACTGAGGCCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATCATCTTAACTTTAATTGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTGGCACTTGATAGGGCAGTCAATGTAGCAGTATGTCCATTAGGTTCAC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAACTCAGGATGGATAGTGGTGACTCAACCAGTAGCAGGAACCCCAACGCTT
TTAAAAACGCATCAAACTTCTGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACAGAGGAAATGCATTTGCCCGCTCGGCAATGGTTTTGGCCACCG
GATTTGTCCAATCCGGATCAACACCCGGCCAAGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA

Domains

Predicted by InterproScan.

• Type II transport protein GspH (GspH) (106-208)

• Prokaryotic N-terminal methylation motif (N_methyl) (67-88)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
fimT	Legionella pneumophila strain Lp02	96.17	100	0.962