Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   CA922_RS06890 Genome accession   NZ_CP021268
Coordinates   1501945..1502286 (+) Length   113 a.a.
NCBI ID   WP_025519545.1    Uniprot ID   A0A128V7G5
Organism   Legionella pneumophila subsp. pneumophila strain Birmingham     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1496945..1507286
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CA922_RS06865 acpP 1497774..1498022 (+) 249 WP_003631752.1 acyl carrier protein -
  CA922_RS06870 fabF 1498042..1499280 (+) 1239 WP_011213689.1 beta-ketoacyl-ACP synthase II -
  CA922_RS06875 mltG 1499281..1500279 (+) 999 WP_027220671.1 endolytic transglycosylase MltG -
  CA922_RS06880 tmk 1500279..1500917 (+) 639 WP_027220670.1 dTMP kinase -
  CA922_RS06885 - 1500914..1501819 (+) 906 WP_011213692.1 DNA polymerase III subunit delta' -
  CA922_RS06890 pilZ 1501945..1502286 (+) 342 WP_025519545.1 PilZ domain-containing protein Machinery gene
  CA922_RS06895 - 1502346..1503134 (+) 789 WP_011213694.1 TatD family hydrolase -
  CA922_RS06900 - 1503246..1504346 (+) 1101 WP_011213695.1 anhydro-N-acetylmuramic acid kinase -
  CA922_RS06905 - 1504402..1505694 (+) 1293 WP_011213696.1 MFS transporter -

Sequence

Protein


Download         Length: 113 a.a.        Molecular weight: 12521.54 Da        Isoelectric Point: 8.2421

>NTDB_id=229461 CA922_RS06890 WP_025519545.1 1501945..1502286(+) (pilZ) [Legionella pneumophila subsp. pneumophila strain Birmingham]
MTEKPQLINCSFPNEASLYMAYMPFVKGGGLFIRTQHVYSLGQSLELSVKLLNENEPYLVTGKIVWITPKGAQGNKPPGV
GIQFTGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=229461 CA922_RS06890 WP_025519545.1 1501945..1502286(+) (pilZ) [Legionella pneumophila subsp. pneumophila strain Birmingham]
ATGACCGAAAAACCACAGCTTATAAACTGCTCATTTCCCAATGAAGCATCTTTGTACATGGCTTACATGCCTTTTGTGAA
GGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATTCTCTAGGGCAGTCGCTTGAATTATCTGTTAAATTGCTTAATG
AAAATGAACCATATTTGGTCACTGGTAAAATAGTCTGGATTACTCCTAAAGGTGCACAAGGTAATAAGCCGCCGGGAGTT
GGTATTCAATTTACCGGTGAAAACAGCCGTTATCTATGTAACAAGATAGAAACTTATTTGGCAGGAATGCTAAAATCATG
TCAGGTTACAGATACTATCTAG

Domains

Predicted by InterproScan.

PilZ domain (PilZ)

(8-101)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A128V7G5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

100

100

1
  pilZ Legionella pneumophila strain ERS1305867

100

100

1

Multiple sequence alignment