Detailed information NTG0229452

Bioinformatically predicted

Overview

• Name: fimT
• Type: Machinery gene
• Locus tag: CA922_RS03440
• Genome accession: NZ_CP021268
• Coordinates: 719510..720217 (-)
• Length: 235 a.a.
• NCBI ID: WP_080447859.1
• Uniprot ID: -
• Organism: Legionella pneumophila subsp. pneumophila strain Birmingham
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 714510..725217

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CA922_RS03425	-	717385..717897 (-)	513	WP_061638284.1	pilus assembly protein	-
CA922_RS03430	-	717894..718961 (-)	1068	WP_061638282.1	PilW family protein	-
CA922_RS03435	pilV	718958..719497 (-)	540	WP_010946368.1	type IV pilus modification protein PilV	-
CA922_RS03440	fimT	719510..720217 (-)	708	WP_080447859.1	GspH/FimT family pseudopilin	Machinery gene
CA922_RS03445	-	720440..721300 (-)	861	WP_061363866.1	polysaccharide deacetylase family protein	-
CA922_RS03450	-	721477..722826 (-)	1350	WP_072356083.1	lpg0634 family Dot/Icm T4SS effector	-
CA922_RS03455	-	723116..724597 (+)	1482	WP_061638277.1	glycosyltransferase family 39 protein	-

Sequence

Protein

• Length: 235 a.a.
• Molecular weight: 24837.41 Da
• Isoelectric Point: 7.0381

>NTDB_id=229452 CA922_RS03440 WP_080447859.1 719510..720217(-) (fimT) [Legionella pneumophila subsp. pneumophila strain Birmingham]
MNKVITESQKFTLRNVANMLFCVDGSVLPAQSNIAQKIQTQGIMYNDLCKDSFDTEAPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP

Nucleotide

• Length: 708 bp

>NTDB_id=229452 CA922_RS03440 WP_080447859.1 719510..720217(-) (fimT) [Legionella pneumophila subsp. pneumophila strain Birmingham]
TTGAACAAAGTGATAACGGAATCACAAAAGTTCACTCTGCGCAACGTAGCTAATATGTTATTTTGCGTTGATGGTAGTGT
ATTGCCCGCACAATCTAATATAGCACAAAAGATACAAACACAAGGCATAATGTACAATGATCTTTGTAAAGACAGCTTCG
ATACTGAGGCCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGCCCATTAGGTTCAC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAGCACCAACACTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACAGAGGAAATGCGTTTGCCCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGTCAAGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (67-88)

• Type II transport protein GspH (GspH) (106-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
fimT	Legionella pneumophila strain Lp02	98.298	100	0.983