Detailed information    

insolico Bioinformatically predicted

Overview

Name   lqsT   Type   Regulator
Locus tag   CA925_RS12915 Genome accession   NZ_CP021266
Coordinates   2847825..2849087 (+) Length   420 a.a.
NCBI ID   WP_014844654.1    Uniprot ID   -
Organism   Legionella pneumophila subsp. pneumophila strain Knoxville     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 2842825..2854087
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CA925_RS12905 ceg32 2843708..2846536 (+) 2829 WP_027224303.1 Dot/Icm T4SS effector Ceg32/SidI -
  CA925_RS12910 mesI 2846538..2847428 (+) 891 WP_014844653.1 Dot/Icm T4SS effector metaeffector MesI -
  CA925_RS12915 lqsT 2847825..2849087 (+) 1263 WP_014844654.1 HAMP domain-containing sensor histidine kinase Regulator
  CA925_RS12920 - 2849135..2849830 (-) 696 WP_011947427.1 iron-containing redox enzyme family protein -
  CA925_RS12925 sdjA 2850237..2852660 (-) 2424 WP_027224305.1 Dot/Icm T4SS effector SdjA -
  CA925_RS12930 dupB 2852732..2853925 (-) 1194 WP_080272683.1 Dot/Icm T4SS effector deubiquitinase DupB/LaiF -

Sequence

Protein


Download         Length: 420 a.a.        Molecular weight: 48630.04 Da        Isoelectric Point: 7.7049

>NTDB_id=229397 CA925_RS12915 WP_014844654.1 2847825..2849087(+) (lqsT) [Legionella pneumophila subsp. pneumophila strain Knoxville]
MQRLKDIFTAIYQYLLKETEDASHQITLFGIVMMINYPLFGVFWKLEHFQLTEEFILRITAALLCACLAFNQFWPKQLLK
FLPVFWYIVLLFCLPYFFAYLTLINNGSTLWLMNCVSAIFFLLLVSSVLGALILLISGVGLAFFHFYILSNNQFVYIPGT
ISLFSLIVTFIAAIIIGALFARDREITYAGRLSGMRMLAGSIAHDLRTPLASIYLQAELQELIVERLNNPEVQKDLKENL
SKITRGIEMSNQLIRMQLNNIQRDKLDTSTFSIYSIKKLLKASLEEYPFKENQKSLIHLNDKNDFSIWIDEVGFKNMMWN
LLKNSLEYIEETHKGEISIWLEQGWEKENFNYLHIKDTAKGLNHKEYEKIFDFFYSGRKEGTGLGLAYCKLLMQAAGGDI
SCKGKKNEFAHFTLKFPKID

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=229397 CA925_RS12915 WP_014844654.1 2847825..2849087(+) (lqsT) [Legionella pneumophila subsp. pneumophila strain Knoxville]
ATGCAAAGGTTAAAAGATATATTTACTGCAATTTACCAATACTTATTAAAAGAAACTGAAGATGCAAGCCACCAAATCAC
TTTATTTGGCATCGTCATGATGATTAATTACCCTCTTTTCGGAGTTTTCTGGAAACTGGAGCATTTTCAACTGACAGAAG
AATTTATTTTACGCATCACTGCAGCCCTCCTCTGTGCCTGTTTGGCATTTAATCAATTTTGGCCAAAACAATTATTAAAA
TTTCTACCTGTTTTTTGGTATATAGTTCTGCTCTTTTGTTTGCCTTACTTTTTTGCTTATTTGACTCTTATAAACAATGG
TTCGACTCTTTGGTTAATGAATTGCGTATCCGCTATCTTTTTTCTTTTATTGGTTTCCAGTGTATTGGGGGCTCTTATAT
TACTTATATCAGGTGTTGGACTTGCTTTTTTTCATTTTTATATTTTATCAAATAATCAGTTTGTCTATATCCCCGGAACC
ATATCACTTTTTAGTTTAATTGTTACGTTTATTGCAGCAATAATCATTGGTGCCTTGTTTGCGCGAGATAGAGAAATTAC
CTATGCCGGACGTTTATCGGGTATGCGCATGCTGGCTGGAAGTATCGCTCATGATTTAAGAACGCCGCTTGCCAGTATTT
ATTTACAAGCTGAATTACAGGAATTGATTGTCGAAAGATTAAATAATCCAGAAGTTCAAAAGGACCTGAAGGAAAATTTA
AGCAAAATTACTCGCGGCATAGAAATGAGTAATCAATTAATTCGTATGCAATTAAATAATATTCAACGAGACAAATTAGA
TACCAGTACATTTTCGATTTATTCCATCAAAAAATTGCTCAAGGCGTCTTTAGAGGAATACCCTTTCAAAGAAAATCAAA
AATCATTGATTCATTTAAATGATAAAAATGATTTTTCCATATGGATTGATGAAGTGGGCTTTAAAAATATGATGTGGAAT
TTGCTAAAAAATAGTCTGGAATATATTGAGGAAACCCATAAAGGCGAAATCTCTATCTGGCTAGAACAAGGATGGGAGAA
AGAGAATTTTAATTACCTCCATATAAAAGATACAGCTAAAGGTTTAAATCATAAAGAATATGAAAAAATATTTGATTTCT
TCTATTCTGGCAGAAAAGAAGGAACTGGTTTGGGCTTGGCCTATTGTAAACTTCTTATGCAAGCAGCAGGTGGTGATATT
TCCTGTAAAGGGAAAAAAAATGAATTCGCTCATTTCACTTTAAAATTCCCCAAAATTGATTAG

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(310-417)

His Kinase A (phospho-acceptor) domain (HisKA)

(198-255)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  lqsT Legionella pneumophila subsp. pneumophila str. Philadelphia 1

99.524

100

0.995

Multiple sequence alignment