Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   RK98_RS02705 Genome accession   NZ_CP026958
Coordinates   471422..472096 (-) Length   224 a.a.
NCBI ID   WP_001166501.1    Uniprot ID   Q932F1
Organism   Staphylococcus aureus strain FDAARGOS_40     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 466422..477096
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RK98_RS02690 (RK98_02690) vraG 467605..469494 (-) 1890 WP_000143615.1 ABC transporter permease VraG -
  RK98_RS02695 (RK98_02695) vraF 469484..470245 (-) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  RK98_RS02700 (RK98_02700) graS 470389..471429 (-) 1041 WP_001061264.1 histidine kinase GraS/ApsS -
  RK98_RS02705 (RK98_02705) braR 471422..472096 (-) 675 WP_001166501.1 response regulator transcription factor GraR/ApsR Regulator
  RK98_RS02710 (RK98_02710) graX 472112..473035 (-) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  RK98_RS02715 (RK98_02715) - 473148..473654 (+) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  RK98_RS02720 (RK98_02720) - 473863..474291 (-) 429 WP_000198504.1 hypothetical protein -
  RK98_RS02730 (RK98_02730) - 474620..475663 (-) 1044 WP_001030775.1 alpha/beta hydrolase -
  RK98_RS02735 (RK98_02735) - 475814..476881 (-) 1068 WP_000980137.1 membrane protein -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26038.85 Da        Isoelectric Point: 4.3563

>NTDB_id=229331 RK98_RS02705 WP_001166501.1 471422..472096(-) (braR) [Staphylococcus aureus strain FDAARGOS_40]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVSRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=229331 RK98_RS02705 WP_001166501.1 471422..472096(-) (braR) [Staphylococcus aureus strain FDAARGOS_40]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCTTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAGTCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q932F1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397


Multiple sequence alignment