Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   BC_RS20820 Genome accession   NC_004722
Coordinates   4132476..4133270 (-) Length   264 a.a.
NCBI ID   WP_011110369.1    Uniprot ID   A0A9Q5QPF5
Organism   Bacillus cereus ATCC 14579     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4127476..4138270
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BC_RS20795 (BC4165) - 4128000..4130072 (-) 2073 WP_011110368.1 sigma-54 interaction domain-containing protein -
  BC_RS20800 (BC4166) - 4130210..4130443 (+) 234 WP_001190213.1 DUF2627 domain-containing protein -
  BC_RS20805 (BC4167) - 4130493..4131221 (-) 729 WP_000172583.1 glycerophosphodiester phosphodiesterase -
  BC_RS20810 (BC4168) - 4131272..4131418 (+) 147 WP_001247671.1 YycC family protein -
  BC_RS20815 (BC4169) - 4131660..4132223 (-) 564 WP_000428230.1 PRK06770 family protein -
  BC_RS20820 (BC4170) spo0A 4132476..4133270 (-) 795 WP_011110369.1 sporulation transcription factor Spo0A Regulator
  BC_RS20825 (BC4172) spoIVB 4133561..4134859 (-) 1299 WP_002024767.1 SpoIVB peptidase -
  BC_RS20830 (BC4173) recN 4134978..4136716 (-) 1739 Protein_4138 DNA repair protein RecN -
  BC_RS20835 (BC4174) argR 4136981..4137430 (-) 450 WP_001032580.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29415.18 Da        Isoelectric Point: 7.1175

>NTDB_id=22932 BC_RS20820 WP_011110369.1 4132476..4133270(-) (spo0A) [Bacillus cereus ATCC 14579]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANAMIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=22932 BC_RS20820 WP_011110369.1 4132476..4133270(-) (spo0A) [Bacillus cereus ATCC 14579]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGTTAGAGAGCTATGTAGCCGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAACCTGATGTACTCG
TTTTAGACATTATTATGCCACACTTAGATGGTTTAGCTGTATTGGAAAAAATGCGACATATTGAAAGGTTAAAACAGCCT
AGCGTAATTATGTTGACAGCATTCGGGCAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCCTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGTGGTAAAGCAAACGCTATGATTAAGCGTCCAC
TACCATCATTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGATGCGAGTATTACGAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGATATATGTATTTACGAGAAGCAATCTCCATGGTATACAATGATATCGAATTATT
AGGATCGATTACGAAAGTATTGTATCCAGATATCGCAAAGAAATATAATACCACAGCAAGCCGTGTGGAGCGCGCAATTC
GTCACGCAATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCTGAGTTTATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAAGCTAGTTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment