Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   RL01_RS07570 Genome accession   NZ_CP026957
Coordinates   1430229..1430903 (-) Length   224 a.a.
NCBI ID   WP_001166500.1    Uniprot ID   Q99VW2
Organism   Staphylococcus aureus strain FDAARGOS_43     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1425229..1435903
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RL01_RS07555 (RL01_07555) vraG 1426412..1428301 (-) 1890 WP_000143616.1 ABC transporter permease VraG -
  RL01_RS07560 (RL01_07560) vraF 1428291..1429052 (-) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  RL01_RS07565 (RL01_07565) graS 1429196..1430236 (-) 1041 WP_001061262.1 histidine kinase GraS/ApsS -
  RL01_RS07570 (RL01_07570) braR 1430229..1430903 (-) 675 WP_001166500.1 response regulator transcription factor GraR/ApsR Regulator
  RL01_RS07575 (RL01_07575) graX 1430919..1431842 (-) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  RL01_RS07580 (RL01_07580) - 1431955..1432461 (+) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  RL01_RS07585 (RL01_07585) - 1432670..1433098 (-) 429 WP_000198504.1 hypothetical protein -
  RL01_RS07595 (RL01_07595) - 1433427..1434470 (-) 1044 WP_001030771.1 alpha/beta hydrolase -
  RL01_RS07600 (RL01_07600) - 1434621..1435688 (-) 1068 WP_000980137.1 membrane protein -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26065.87 Da        Isoelectric Point: 4.3563

>NTDB_id=229290 RL01_RS07570 WP_001166500.1 1430229..1430903(-) (braR) [Staphylococcus aureus strain FDAARGOS_43]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=229290 RL01_RS07570 WP_001166500.1 1430229..1430903(-) (braR) [Staphylococcus aureus strain FDAARGOS_43]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCTTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q99VW2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397


Multiple sequence alignment