Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilZ   Type   Machinery gene
Locus tag   CA930_RS06785 Genome accession   NZ_CP021263
Coordinates   1501157..1501498 (+) Length   113 a.a.
NCBI ID   WP_027226909.1    Uniprot ID   A0A2S6EZB2
Organism   Legionella pneumophila subsp. fraseri strain D-3137     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1496157..1506498
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CA930_RS06760 acpP 1496984..1497232 (+) 249 WP_003631752.1 acyl carrier protein -
  CA930_RS06765 fabF 1497252..1498490 (+) 1239 WP_027226905.1 beta-ketoacyl-ACP synthase II -
  CA930_RS06770 mltG 1498491..1499489 (+) 999 WP_027226906.1 endolytic transglycosylase MltG -
  CA930_RS06775 tmk 1499489..1500127 (+) 639 WP_027226907.1 dTMP kinase -
  CA930_RS06780 - 1500124..1501029 (+) 906 WP_027226908.1 DNA polymerase III subunit delta' -
  CA930_RS06785 pilZ 1501157..1501498 (+) 342 WP_027226909.1 PilZ domain-containing protein Machinery gene
  CA930_RS06790 - 1501554..1502342 (+) 789 WP_027226910.1 TatD family hydrolase -
  CA930_RS06795 - 1502842..1504194 (+) 1353 WP_027226911.1 hypothetical protein -
  CA930_RS06800 - 1504297..1505397 (+) 1101 WP_027226912.1 anhydro-N-acetylmuramic acid kinase -

Sequence


Protein


Download         Length: 113 a.a.        Molecular weight: 12469.49 Da        Isoelectric Point: 8.2421

>NTDB_id=229253 CA930_RS06785 WP_027226909.1 1501157..1501498(+) (pilZ) [Legionella pneumophila subsp. fraseri strain D-3137]
MTEKPQLINCSFPNEASLYIAYMPFVKGGGLFIRTQHVYPLGQSLELSVKLLNENEPYLVAGKVVWITPKGAQGNKPPGV
GIQFTGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=229253 CA930_RS06785 WP_027226909.1 1501157..1501498(+) (pilZ) [Legionella pneumophila subsp. fraseri strain D-3137]
ATGACCGAAAAACCACAGCTTATAAACTGCTCATTTCCCAATGAAGCATCTTTGTATATAGCTTATATGCCTTTTGTGAA
AGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATCCTTTAGGACAATCACTTGAATTATCGGTTAAGTTACTCAATG
AAAATGAACCTTATTTGGTCGCTGGTAAAGTAGTCTGGATTACTCCTAAAGGCGCGCAAGGTAATAAGCCTCCGGGAGTT
GGTATTCAATTTACTGGTGAAAATAGTCGTTATTTATGTAACAAGATAGAAACCTACTTGGCGGGAATGTTAAAATCATG
TCAAGTTACAGATACTATCTAG

Domains


Predicted by InterproScan.

(9-101)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2S6EZB2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

96.46

100

0.965

  pilZ Legionella pneumophila strain ERS1305867

96.46

100

0.965


Multiple sequence alignment