Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilZ   Type   Machinery gene
Locus tag   CA934_RS07335 Genome accession   NZ_CP021259
Coordinates   1580356..1580697 (+) Length   113 a.a.
NCBI ID   WP_027226909.1    Uniprot ID   A0A2S6EZB2
Organism   Legionella pneumophila strain D-7708     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1575356..1585697
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CA934_RS07310 acpP 1576183..1576431 (+) 249 WP_003631752.1 acyl carrier protein -
  CA934_RS07315 fabF 1576451..1577689 (+) 1239 WP_027226905.1 beta-ketoacyl-ACP synthase II -
  CA934_RS07320 mltG 1577690..1578688 (+) 999 WP_106225230.1 endolytic transglycosylase MltG -
  CA934_RS07325 tmk 1578688..1579326 (+) 639 WP_106225231.1 dTMP kinase -
  CA934_RS07330 - 1579323..1580228 (+) 906 WP_106225232.1 DNA polymerase III subunit delta' -
  CA934_RS07335 pilZ 1580356..1580697 (+) 342 WP_027226909.1 PilZ domain-containing protein Machinery gene
  CA934_RS07340 - 1580753..1581541 (+) 789 WP_192877362.1 TatD family hydrolase -
  CA934_RS07345 - 1581667..1582767 (+) 1101 WP_106225234.1 anhydro-N-acetylmuramic acid kinase -
  CA934_RS07350 - 1582823..1584115 (+) 1293 WP_062727438.1 MFS transporter -

Sequence


Protein


Download         Length: 113 a.a.        Molecular weight: 12469.49 Da        Isoelectric Point: 8.2421

>NTDB_id=229170 CA934_RS07335 WP_027226909.1 1580356..1580697(+) (pilZ) [Legionella pneumophila strain D-7708]
MTEKPQLINCSFPNEASLYIAYMPFVKGGGLFIRTQHVYPLGQSLELSVKLLNENEPYLVAGKVVWITPKGAQGNKPPGV
GIQFTGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=229170 CA934_RS07335 WP_027226909.1 1580356..1580697(+) (pilZ) [Legionella pneumophila strain D-7708]
ATGACCGAAAAACCACAGCTTATAAACTGTTCATTCCCCAATGAAGCATCTTTGTATATAGCTTATATGCCTTTTGTGAA
AGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATCCTTTAGGACAATCACTTGAATTATCGGTTAAGTTACTCAATG
AAAATGAACCTTATTTGGTCGCTGGTAAAGTAGTCTGGATTACTCCTAAAGGCGCGCAAGGTAATAAGCCTCCGGGAGTT
GGTATTCAATTTACTGGTGAAAATAGTCGTTATTTATGTAACAAGATAGAAACCTACTTGGCGGGAATGTTAAAATCATG
TCAAGTTACAGATACTATCTAG

Domains


Predicted by InterproScan.

(9-101)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2S6EZB2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

96.46

100

0.965

  pilZ Legionella pneumophila strain ERS1305867

96.46

100

0.965


Multiple sequence alignment