Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | CA934_RS03475 | Genome accession | NZ_CP021259 |
| Coordinates | 723498..724202 (-) | Length | 234 a.a. |
| NCBI ID | WP_106224872.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain D-7708 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 718498..729202
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA934_RS03460 | - | 721373..721885 (-) | 513 | WP_106224870.1 | pilus assembly protein | - |
| CA934_RS03465 | - | 721882..722949 (-) | 1068 | WP_106224871.1 | PilW family protein | - |
| CA934_RS03470 | pilV | 722946..723485 (-) | 540 | WP_027223685.1 | type IV pilus modification protein PilV | - |
| CA934_RS03475 | fimT | 723498..724202 (-) | 705 | WP_106224872.1 | GspH/FimT family pseudopilin | Machinery gene |
| CA934_RS03480 | - | 724415..725275 (-) | 861 | WP_192877318.1 | polysaccharide deacetylase family protein | - |
| CA934_RS03485 | - | 725451..726800 (-) | 1350 | WP_106224874.1 | lpg0634 family Dot/Icm T4SS effector | - |
| CA934_RS03490 | - | 727090..728571 (+) | 1482 | WP_106224875.1 | glycosyltransferase family 39 protein | - |
Sequence
Protein
Download Length: 234 a.a. Molecular weight: 24830.43 Da Isoelectric Point: 7.9577
>NTDB_id=229161 CA934_RS03475 WP_106224872.1 723498..724202(-) (fimT) [Legionella pneumophila strain D-7708]
MNKVIRESQRFTVSNVATLLFCVDTSVLPTKSNIAQNKETKIIYNHLCKDSFDTEIPLNSSPLSIAGFTLVELLVTLSVF
AIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPAAGTPTLL
KTHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGATPGQAVWNNGALNCP
MNKVIRESQRFTVSNVATLLFCVDTSVLPTKSNIAQNKETKIIYNHLCKDSFDTEIPLNSSPLSIAGFTLVELLVTLSVF
AIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPAAGTPTLL
KTHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGATPGQAVWNNGALNCP
Nucleotide
Download Length: 705 bp
>NTDB_id=229161 CA934_RS03475 WP_106224872.1 723498..724202(-) (fimT) [Legionella pneumophila strain D-7708]
TTGAATAAAGTGATAAGGGAATCACAAAGGTTCACTGTGAGCAATGTCGCTACTTTATTATTTTGTGTGGACACAAGTGT
GTTGCCCACAAAATCTAATATAGCACAAAATAAAGAAACAAAAATAATATACAATCACCTTTGCAAAGACAGCTTTGATA
CTGAAATCCCCCTTAACAGTAGCCCTCTTTCTATAGCAGGATTCACGCTGGTTGAGTTATTAGTCACCCTATCTGTTTTC
GCCATCATCTTAACTCTAATTGTACCTTCATTAAGGACAATGATTTTGAATAACCGTTTGACTTCAAACATTGATTCATT
GGTAAGCTCATTAAATTATGCACGCGGAGTGGCACTTGATCGGGCCGTCAATGTAGCAGTATGTCCGTTAGGCTCACCAG
GTTCAACAGCATGTGGCGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCCGCAGCCGGCACACCCACTCTTTTA
AAAACTCACCAAACCTCAGTGAATGACCCTGTTATCACATCTAATGTATCCAGTGTTGTTTTTGACCCGCATGGATTATC
AACTACCCAAAGTAACTTTACTATGTGTGATAACCGAGGAAATGCGTTTGCCCGATCTGCAATGGTTTTGGCTACCGGAT
TTGTCCAATCTGGAGCAACACCCGGCCAGGCTGTCTGGAATAATGGGGCTCTAAACTGCCCTTGA
TTGAATAAAGTGATAAGGGAATCACAAAGGTTCACTGTGAGCAATGTCGCTACTTTATTATTTTGTGTGGACACAAGTGT
GTTGCCCACAAAATCTAATATAGCACAAAATAAAGAAACAAAAATAATATACAATCACCTTTGCAAAGACAGCTTTGATA
CTGAAATCCCCCTTAACAGTAGCCCTCTTTCTATAGCAGGATTCACGCTGGTTGAGTTATTAGTCACCCTATCTGTTTTC
GCCATCATCTTAACTCTAATTGTACCTTCATTAAGGACAATGATTTTGAATAACCGTTTGACTTCAAACATTGATTCATT
GGTAAGCTCATTAAATTATGCACGCGGAGTGGCACTTGATCGGGCCGTCAATGTAGCAGTATGTCCGTTAGGCTCACCAG
GTTCAACAGCATGTGGCGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCCGCAGCCGGCACACCCACTCTTTTA
AAAACTCACCAAACCTCAGTGAATGACCCTGTTATCACATCTAATGTATCCAGTGTTGTTTTTGACCCGCATGGATTATC
AACTACCCAAAGTAACTTTACTATGTGTGATAACCGAGGAAATGCGTTTGCCCGATCTGCAATGGTTTTGGCTACCGGAT
TTGTCCAATCTGGAGCAACACCCGGCCAGGCTGTCTGGAATAATGGGGCTCTAAACTGCCCTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Legionella pneumophila strain Lp02 |
89.362 |
100 |
0.897 |