Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   SAG_RS08705 Genome accession   NC_004116
Coordinates   1200797..1201279 (-) Length   160 a.a.
NCBI ID   WP_000163512.1    Uniprot ID   Q8DZB3
Organism   Streptococcus agalactiae 2603V/R     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1195797..1206279
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAG_RS08685 (SAG1192) alsS 1196056..1197738 (-) 1683 WP_000140344.1 acetolactate synthase AlsS -
  SAG_RS08690 (SAG1193) - 1197848..1199074 (-) 1227 WP_000934874.1 tetratricopeptide repeat protein -
  SAG_RS08695 (SAG1194) - 1199064..1200254 (-) 1191 WP_001081533.1 AI-2E family transporter -
  SAG_RS08700 (SAG1195) - 1200346..1200807 (-) 462 WP_000796049.1 NUDIX hydrolase -
  SAG_RS08705 (SAG1196) mutX 1200797..1201279 (-) 483 WP_000163512.1 NUDIX hydrolase Machinery gene
  SAG_RS08710 (SAG1197) hylB 1201497..1204715 (+) 3219 WP_000403417.1 hyaluronate lyase -
  SAG_RS08715 (SAG1198) rfbB 1204767..1205813 (-) 1047 WP_000134279.1 dTDP-glucose 4,6-dehydratase -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18837.23 Da        Isoelectric Point: 4.5116

>NTDB_id=22901 SAG_RS08705 WP_000163512.1 1200797..1201279(-) (mutX) [Streptococcus agalactiae 2603V/R]
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=22901 SAG_RS08705 WP_000163512.1 1200797..1201279(-) (mutX) [Streptococcus agalactiae 2603V/R]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGCACCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAGTGGATCTCGGTAGGTGGTAAACTGGAGGCAGGTGAAACTCCTGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACGGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACTTT
AGAATGGGTACCATATGATCAAGTTCTTTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DZB3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.698

99.375

0.712