Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   B9N48_RS07490 Genome accession   NZ_CP021169
Coordinates   1412415..1412990 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain TLO3     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1407415..1417990
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B9N48_RS07460 dapD 1407603..1408313 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  B9N48_RS07465 dapI 1408383..1409507 (+) 1125 WP_046380993.1 N-acetyldiaminopimelate deacetylase -
  B9N48_RS07470 ykuS 1409569..1409814 (+) 246 WP_003232382.1 YkuS family protein -
  B9N48_RS07475 mscT 1409851..1410654 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  B9N48_RS07480 ahpA 1410891..1411433 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  B9N48_RS07485 ykuV 1411503..1411949 (+) 447 WP_014476671.1 thiol-disulfide oxidoreductase YkuV -
  B9N48_RS07490 rok 1412415..1412990 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  B9N48_RS07495 cse15 1413031..1413996 (-) 966 WP_024571970.1 spore protein Cse15 -
  B9N48_RS07500 mobA 1414133..1414732 (+) 600 WP_086343787.1 molybdenum cofactor guanylyltransferase -
  B9N48_RS07505 moeB 1414783..1415802 (+) 1020 WP_086343788.1 molybdopterin-synthase adenylyltransferase MoeB -
  B9N48_RS07510 glp 1415820..1417112 (+) 1293 WP_086343789.1 gephyrin-like molybdotransferase Glp -
  B9N48_RS07515 mobB 1417073..1417594 (+) 522 WP_086343790.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=228761 B9N48_RS07490 WP_003232378.1 1412415..1412990(+) (rok) [Bacillus subtilis strain TLO3]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=228761 B9N48_RS07490 WP_003232378.1 1412415..1412990(+) (rok) [Bacillus subtilis strain TLO3]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAACGAGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment