Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   B9N48_RS04450 Genome accession   NZ_CP021169
Coordinates   860828..861622 (+) Length   264 a.a.
NCBI ID   WP_086343602.1    Uniprot ID   -
Organism   Bacillus subtilis strain TLO3     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 855828..866622
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B9N48_RS04420 sxzA 856667..857698 (+) 1032 WP_086343598.1 iron ABC transporter permease -
  B9N48_RS04425 yfhB 857813..858694 (+) 882 WP_086343599.1 PhzF family phenazine biosynthesis isomerase -
  B9N48_RS04430 yfhC 858782..859366 (+) 585 WP_086343600.1 nitroreductase -
  B9N48_RS04435 yfhD 859405..859596 (-) 192 WP_003233561.1 YfhD family protein -
  B9N48_RS04440 yfhE 859663..859773 (-) 111 WP_003223230.1 YfhE family protein -
  B9N48_RS04445 yfhF 859828..860739 (-) 912 WP_086343601.1 TIGR01777 family oxidoreductase -
  B9N48_RS04450 recX 860828..861622 (+) 795 WP_086343602.1 recombination regulator RecX Regulator
  B9N48_RS04455 yfhH 861624..861938 (+) 315 WP_003244592.1 YfhH family protein -
  B9N48_RS04460 yfhI 862081..863274 (+) 1194 WP_003243500.1 MFS transporter -
  B9N48_RS04465 sspK 863306..863458 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  B9N48_RS04470 yfhJ 863583..863852 (+) 270 WP_003243789.1 YfhJ family protein -
  B9N48_RS04475 yfhK 863997..864515 (+) 519 WP_086343603.1 SH3 domain-containing protein -
  B9N48_RS04480 spdL 864600..864932 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  B9N48_RS04485 ephM 864919..865779 (+) 861 WP_086343604.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31057.28 Da        Isoelectric Point: 6.6686

>NTDB_id=228743 B9N48_RS04450 WP_086343602.1 860828..861622(+) (recX) [Bacillus subtilis strain TLO3]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFASAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEVLSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=228743 B9N48_RS04450 WP_086343602.1 860828..861622(+) (recX) [Bacillus subtilis strain TLO3]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCTCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGTGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992

Multiple sequence alignment