Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   BET69_RS08105 Genome accession   NZ_CP021162
Coordinates   1679629..1680255 (+) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei strain 234     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 1674629..1685255
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BET69_RS08085 (BET69_08030) - 1675028..1676788 (-) 1761 WP_003858160.1 Lon protease family protein -
  BET69_RS08090 (BET69_08035) matP 1676975..1677427 (+) 453 WP_003858158.1 macrodomain Ter protein MatP -
  BET69_RS08095 (BET69_08040) ompA 1677493..1678545 (-) 1053 WP_003858156.1 porin OmpA -
  BET69_RS08100 (BET69_08045) sulA 1678902..1679411 (-) 510 WP_003858155.1 SOS-induced cell division inhibitor SulA -
  BET69_RS08105 (BET69_08050) sxy/tfoX 1679629..1680255 (+) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  BET69_RS08110 (BET69_08055) yccS 1680212..1682374 (-) 2163 WP_110108299.1 YccS family putative transporter -
  BET69_RS08115 (BET69_08060) - 1682393..1682839 (-) 447 WP_003858149.1 YccF domain-containing protein -
  BET69_RS08120 (BET69_08065) helD 1682962..1685016 (+) 2055 WP_110108300.1 DNA helicase IV -

Sequence


Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=228645 BET69_RS08105 WP_023315767.1 1679629..1680255(+) (sxy/tfoX) [Enterobacter hormaechei strain 234]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=228645 BET69_RS08105 WP_023315767.1 1679629..1680255(+) (sxy/tfoX) [Enterobacter hormaechei strain 234]
ATGAAAAAGATATCTTATGAGCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCTTCCTCTTTTCTGACCCTGATGAAACGAGGACGCCCAGTGCTGCTTAAT
TACTACCGTGTGGACGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCGAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572


Multiple sequence alignment