Detailed information NTG0228593

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: CAY62_RS01695
• Genome accession: NZ_CP021151
• Coordinates: 364519..367911 (-)
• Length: 1130 a.a.
• NCBI ID: WP_086366352.1
• Uniprot ID: -
• Organism: Photobacterium damselae subsp. damselae strain KC-Na-1
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 359519..372911

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CAY62_RS01680 (CAY62_01675)	-	359994..361019 (-)	1026	WP_086366349.1	ABC transporter permease	-
CAY62_RS01685 (CAY62_01680)	-	361022..362008 (-)	987	WP_086366350.1	ABC transporter permease	-
CAY62_RS01690 (CAY62_01685)	-	362155..363831 (-)	1677	WP_086366351.1	ABC transporter substrate-binding protein	-
CAY62_RS01695 (CAY62_01690)	chiS	364519..367911 (-)	3393	WP_086366352.1	response regulator	Regulator
CAY62_RS01700 (CAY62_01695)	rsmC	368225..369244 (-)	1020	WP_086366353.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
CAY62_RS01705 (CAY62_01700)	-	369444..370532 (-)	1089	WP_044176757.1	AI-2E family transporter	-
CAY62_RS01710 (CAY62_01705)	hemL	370905..372197 (-)	1293	WP_086366354.1	glutamate-1-semialdehyde 2,1-aminomutase	-

Sequence

Protein

• Length: 1130 a.a.
• Molecular weight: 127143.14 Da
• Isoelectric Point: 6.7954

>NTDB_id=228593 CAY62_RS01695 WP_086366352.1 364519..367911(-) (chiS) [Photobacterium damselae subsp. damselae strain KC-Na-1]
MQTKQRFKRLQHTLMLAFLVLSITPLTLSALYFLNSHSKDLAEQSTSHLASLLENKKKQLNQFFAAKESEVQSFARSELA
NASGGRFYGLVGAYHQLGNINNLLNGLTRDQYFKEILTAKGQKSTTNSASYVGHERYRLMYKRYNWAFDEYLKRSDFSDI
LLVDLKGNVVYSAKKPQYFALNLASGKGALKGLQPTFQAISTQAQQLKQDQEVVPVAFADFNLGGNNQSEQAWFAAPIIQ
QGYLHSYVFFQLDINKIATLLADKPQNGQTVQTLLVGQDHHMRLPNNGDLPQQLISPAINQALAGKTGVGSLLNYNNIAV
LSAFTPIKIFNHTWALVVELPEKEAFARIHQLEKIFFAAMLTAIVLVILAALWLSNSITAPLLRLTWASERVSAGDLEQK
IEGTERKDEIGRLATSFARMQCSIREKMSLISKQNQELEKNIHVIKQQNDDLQTADKLKDEFIATTSHELRTPLHGMIGI
AESLLAGANGPTQGAQRRQLEMLINSGQRLTNLVDDLLDYHKMRYGDLDIDKHAVDLASAVRLVLELSGHLLGTKPVRII
NQIPADLPLVQADEQRLEQVLYNLVGNAIKYTSEGKIVLSATVLENQVRIQVVDTGQGIPAEQLEHIFEPLVQANTNHAN
YRQGAGLGLTISRQLLELMGGRLYVSSQPMVGTTFSFTLNIASDEQIRQSHDHGKIHHFQAPLCDATPIEIANLPENLNG
ELLLVVDDEPVNLQILNNFLRLEGYRVLTAESGKQALELVQSHKPALILLDIMMPEMSGYEVCSQLRQQYSQLELPIMML
SALGQVKDRVKGFECGANDYLTKPFNKEELTARIKAHLQAGKTEFEREKNRQLAQEIQQRKQVELSLLETQTRLLGLLES
TTEAILCIQNSGRIRYANNAAAKLFKRTPEQLERHSIDELLLTHLPDELQNNHHYSGSLCFKIGEQQQNLATDILNLPEE
SGLKQMFIFGNSGPSPQQRVQVLEEAIDVLSSYAFDGNKDNLQQLRELGGEFTRLADKLGNDAPNKQDILRELLVDAMRT
TLEVWEQDTKKTKFDLAEESGLWRVYLDRSTLQTRTLDKYLHVETLPKTPRWRTVISTIDYVLDKGSAQNIQHQQLSQMR
DKLQNLLRAS

Nucleotide

• Length: 3393 bp

>NTDB_id=228593 CAY62_RS01695 WP_086366352.1 364519..367911(-) (chiS) [Photobacterium damselae subsp. damselae strain KC-Na-1]
ATGCAAACAAAACAACGATTTAAACGTCTTCAGCATACATTAATGCTGGCTTTTCTTGTTCTTAGTATTACGCCATTAAC
TCTCTCCGCACTGTATTTCCTCAACTCACACTCCAAGGATTTGGCAGAGCAAAGCACATCGCATTTGGCGTCTCTTCTTG
AGAATAAGAAAAAACAACTAAACCAATTTTTTGCGGCTAAAGAGTCTGAGGTGCAAAGTTTTGCTCGATCAGAGCTTGCT
AATGCCAGTGGTGGCCGCTTCTATGGGTTAGTAGGGGCTTACCATCAATTAGGTAATATCAATAATCTGTTAAATGGCCT
GACGCGAGACCAGTATTTTAAAGAGATTCTCACGGCAAAAGGGCAAAAAAGTACCACCAACAGTGCCAGTTATGTCGGCC
ATGAGCGCTATCGTTTAATGTATAAGCGTTATAACTGGGCATTTGATGAATATCTTAAGCGCTCAGATTTTAGTGATATC
TTATTGGTTGATTTAAAAGGTAATGTGGTCTATTCAGCGAAAAAACCACAGTACTTTGCTTTAAATCTTGCTTCAGGCAA
GGGAGCCTTAAAAGGGTTACAACCAACTTTCCAAGCCATTAGCACTCAAGCTCAACAGCTAAAACAAGACCAAGAAGTCG
TACCCGTTGCTTTTGCCGATTTTAACCTAGGAGGCAATAATCAGTCAGAACAAGCCTGGTTTGCCGCCCCTATCATTCAG
CAAGGGTATTTACACAGCTACGTATTTTTCCAGCTAGATATCAATAAAATTGCAACCTTACTGGCCGATAAACCGCAAAA
TGGTCAAACGGTGCAAACCCTATTGGTAGGCCAAGATCATCACATGCGCTTACCCAATAATGGAGATTTGCCACAACAAT
TAATCAGCCCAGCCATCAACCAAGCACTTGCAGGTAAAACTGGGGTAGGCAGTTTACTTAACTACAATAATATTGCCGTA
CTCAGTGCCTTTACTCCGATTAAAATCTTTAACCACACCTGGGCATTGGTAGTTGAATTACCCGAAAAAGAAGCATTTGC
TCGTATTCATCAACTCGAAAAAATCTTTTTTGCAGCCATGCTTACTGCCATCGTATTAGTGATTTTAGCCGCTCTTTGGT
TATCAAACTCAATAACGGCTCCCCTATTACGCTTAACTTGGGCATCAGAGCGAGTCTCTGCAGGCGATCTAGAGCAAAAA
ATCGAAGGAACAGAACGTAAAGATGAAATTGGCCGTCTTGCCACTAGCTTTGCTCGAATGCAATGTTCTATTCGGGAAAA
GATGAGTTTGATTAGCAAGCAAAATCAAGAACTTGAAAAAAATATTCACGTAATCAAACAACAAAATGATGATCTGCAAA
CCGCCGACAAACTAAAAGATGAGTTCATAGCGACGACTTCACATGAGTTGCGCACCCCTCTTCACGGTATGATTGGGATA
GCCGAATCCTTACTTGCTGGAGCAAATGGGCCAACGCAAGGAGCCCAACGTCGTCAATTGGAAATGTTGATCAACAGTGG
GCAGCGTCTAACGAACTTAGTTGATGATTTACTTGATTATCACAAAATGCGTTATGGCGATCTCGATATTGATAAACATG
CAGTCGATCTTGCCAGTGCTGTTCGGTTAGTCCTTGAATTATCAGGCCATTTATTGGGAACCAAACCGGTTCGAATCATT
AACCAAATACCCGCTGATTTACCTTTAGTTCAAGCCGATGAACAACGCCTAGAGCAAGTGCTGTATAACTTGGTTGGTAA
TGCAATCAAATATACCTCTGAAGGTAAGATTGTGCTTTCTGCAACAGTATTGGAAAATCAAGTTCGCATTCAAGTGGTTG
ATACAGGGCAAGGAATTCCGGCAGAACAACTTGAACATATCTTTGAACCACTGGTACAAGCCAACACCAATCATGCTAAC
TATCGTCAAGGAGCGGGCCTTGGTTTAACCATTAGCCGTCAATTACTGGAGTTAATGGGTGGTCGCCTGTACGTCAGCAG
TCAGCCAATGGTGGGAACCACTTTTAGTTTCACCCTAAACATCGCCTCCGACGAACAAATTCGCCAAAGCCATGATCACG
GTAAAATTCATCACTTCCAAGCTCCATTGTGTGATGCCACTCCGATTGAAATAGCAAATTTACCTGAAAACTTAAATGGC
GAACTGCTACTCGTGGTTGATGATGAACCCGTTAATCTTCAGATACTCAATAACTTCCTAAGACTGGAAGGGTATCGAGT
TCTCACCGCCGAAAGCGGAAAACAGGCTCTTGAGTTAGTACAAAGCCACAAACCTGCACTGATTTTACTCGATATCATGA
TGCCAGAAATGAGTGGTTATGAGGTTTGTAGCCAATTGCGCCAACAATATAGCCAATTAGAACTACCGATCATGATGCTA
TCTGCATTGGGGCAAGTTAAAGATCGCGTTAAAGGTTTTGAATGCGGCGCCAATGATTACCTAACAAAACCTTTTAATAA
AGAAGAACTTACCGCACGTATAAAAGCTCATCTTCAAGCGGGGAAAACTGAATTTGAGCGAGAAAAAAATCGTCAATTAG
CTCAAGAAATTCAACAACGTAAGCAAGTTGAGTTAAGTTTACTTGAGACCCAAACTCGATTACTTGGCCTATTAGAATCC
ACCACCGAAGCCATTTTATGTATTCAAAATAGTGGGCGAATTCGTTATGCCAATAACGCTGCGGCTAAATTATTTAAACG
CACCCCAGAGCAATTGGAGCGCCACTCTATCGATGAACTACTGCTAACCCACTTACCTGATGAGTTACAAAATAATCATC
ATTACAGTGGTTCACTGTGTTTCAAAATTGGCGAACAACAACAAAACCTTGCTACCGATATCCTCAATTTGCCAGAAGAG
TCTGGACTTAAGCAGATGTTTATCTTCGGTAATAGTGGGCCATCGCCACAGCAACGAGTACAAGTGCTTGAAGAAGCTAT
TGATGTGTTATCGAGCTATGCTTTTGATGGTAACAAAGACAACTTACAACAATTGCGTGAGCTAGGTGGAGAATTCACCA
GACTGGCAGACAAATTGGGTAATGATGCCCCTAATAAACAAGATATTTTGCGCGAATTGCTGGTTGATGCCATGCGTACA
ACGCTTGAGGTTTGGGAGCAAGATACGAAAAAAACCAAGTTTGATTTAGCCGAAGAGAGTGGATTATGGCGTGTTTATCT
CGATCGCAGTACGCTACAAACTCGAACCTTAGATAAATATCTCCATGTTGAGACTCTTCCTAAAACGCCACGTTGGCGCA
CGGTTATTAGCACCATAGACTATGTGCTTGATAAAGGCAGTGCTCAAAATATCCAACATCAACAGCTGAGCCAGATGCGA
GATAAATTGCAGAACTTATTACGAGCAAGCTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (724-835)

• HAMP domain (HAMP) (373-421)

• His Kinase A (phospho-acceptor) domain (HisKA) (459-524)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (573-680)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	58.584	100	0.586