Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CAP31_RS02290 Genome accession   NZ_CP021138
Coordinates   453050..453421 (-) Length   123 a.a.
NCBI ID   WP_087448221.1    Uniprot ID   A0A1Y0GAS1
Organism   Sulfuriferula sp. AH1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 448050..458421
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CAP31_RS02275 (CAP31_02275) - 449955..452087 (-) 2133 WP_087446054.1 methyl-accepting chemotaxis protein -
  CAP31_RS02280 (CAP31_02280) - 452132..452641 (-) 510 WP_087446055.1 chemotaxis protein CheW -
  CAP31_RS02285 (CAP31_02285) - 452673..453035 (-) 363 WP_087446056.1 PleD family two-component system response regulator -
  CAP31_RS02290 (CAP31_02290) pilG 453050..453421 (-) 372 WP_087448221.1 PleD family two-component system response regulator Regulator
  CAP31_RS02295 (CAP31_02295) - 453643..453795 (-) 153 WP_369802453.1 rubredoxin -
  CAP31_RS02300 (CAP31_02300) thiD 453891..454712 (+) 822 WP_087446058.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  CAP31_RS02305 (CAP31_02305) thiE 454709..455335 (+) 627 WP_087446059.1 thiamine phosphate synthase -
  CAP31_RS14955 - 455339..455524 (+) 186 WP_223247336.1 hypothetical protein -
  CAP31_RS02310 (CAP31_02310) - 455512..456621 (+) 1110 WP_255377133.1 glutamate-1-semialdehyde 2,1-aminomutase -
  CAP31_RS02315 (CAP31_02315) ccsB 456702..457844 (-) 1143 WP_087446060.1 c-type cytochrome biogenesis protein CcsB -

Sequence

Protein


Download         Length: 123 a.a.        Molecular weight: 13748.83 Da        Isoelectric Point: 6.3129

>NTDB_id=228498 CAP31_RS02290 WP_087448221.1 453050..453421(-) (pilG) [Sulfuriferula sp. AH1]
MVIDDSNTIRRSAEIFLQQAGCEIILAEDGFDALAKITDRQPDVIFVDVMMPRLDGYQTCALIKKNSRFKATPVIMLSSK
DGLFDKARGRIVGSNEYLTKPFTKDTLLTAVQRYAPTTNESNI

Nucleotide


Download         Length: 372 bp        

>NTDB_id=228498 CAP31_RS02290 WP_087448221.1 453050..453421(-) (pilG) [Sulfuriferula sp. AH1]
ATGGTGATCGATGACAGCAACACCATACGCAGAAGCGCAGAAATATTTCTGCAACAGGCTGGCTGCGAAATTATCCTCGC
CGAGGATGGCTTTGACGCCCTTGCCAAAATCACCGACCGGCAGCCTGATGTCATCTTCGTAGATGTGATGATGCCACGCC
TGGACGGTTATCAAACTTGCGCTCTCATCAAAAAAAACAGTCGTTTCAAAGCCACGCCGGTCATTATGCTTTCCAGCAAG
GACGGCCTCTTTGACAAGGCCCGCGGCCGCATCGTGGGGTCCAACGAATACCTTACCAAACCTTTTACTAAAGATACATT
ATTAACGGCTGTGCAGCGTTATGCACCAACGACTAATGAATCGAATATTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Y0GAS1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

65.812

95.122

0.626

Multiple sequence alignment