Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   CAH07_RS21810 Genome accession   NZ_CP021123
Coordinates   3730333..3730473 (-) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain SEM-9     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3725333..3735473
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CAH07_RS21805 - 3729215..3730387 (-) 1173 Protein_3793 condensation domain-containing protein -
  CAH07_RS21810 comS 3730333..3730473 (-) 141 WP_010886404.1 competence protein ComS Regulator
  CAH07_RS21815 srfAB 3730517..3733609 (-) 3093 Protein_3795 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=228434 CAH07_RS21810 WP_010886404.1 3730333..3730473(-) (comS) [Bacillus subtilis strain SEM-9]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=228434 CAH07_RS21810 WP_010886404.1 3730333..3730473(-) (comS) [Bacillus subtilis strain SEM-9]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment