Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | CAH07_RS21265 | Genome accession | NZ_CP021123 |
| Coordinates | 4078673..4078963 (+) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain SEM-9 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4073673..4083963
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CAH07_RS21250 (CAH07_21055) | yabE | 4073868..4075181 (-) | 1314 | WP_029726392.1 | ubiquitin-like domain-containing protein | - |
| CAH07_RS21255 (CAH07_21060) | dayD | 4075337..4076104 (-) | 768 | WP_029726393.1 | TatD family hydrolase | - |
| CAH07_RS21260 (CAH07_21065) | metG | 4076184..4078178 (-) | 1995 | WP_014662479.1 | methionine--tRNA ligase | - |
| CAH07_RS21265 (CAH07_21070) | abrB | 4078673..4078963 (+) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| CAH07_RS21270 (CAH07_21075) | rsmI | 4079012..4079890 (-) | 879 | WP_019712967.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| CAH07_RS21275 (CAH07_21080) | yazA | 4079865..4080164 (-) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| CAH07_RS21280 (CAH07_21085) | trmNF | 4080151..4080894 (-) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| CAH07_RS21285 (CAH07_21090) | yabA | 4080953..4081312 (-) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| CAH07_RS21290 (CAH07_21095) | ricT | 4081327..4082154 (-) | 828 | WP_003243571.1 | competence/sporulation regulator complex protein RicT | - |
| CAH07_RS21295 (CAH07_21100) | holB | 4082157..4083146 (-) | 990 | WP_003244417.1 | DNA polymerase III subunit delta' | - |
| CAH07_RS21300 (CAH07_21105) | yaaR | 4083158..4083598 (-) | 441 | WP_009966249.1 | YaaR family protein | - |
| CAH07_RS21305 (CAH07_21110) | darA | 4083611..4083940 (-) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=228431 CAH07_RS21265 WP_003226760.1 4078673..4078963(+) (abrB) [Bacillus subtilis strain SEM-9]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=228431 CAH07_RS21265 WP_003226760.1 4078673..4078963(+) (abrB) [Bacillus subtilis strain SEM-9]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |