Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   CAH07_RS16900 Genome accession   NZ_CP021123
Coordinates   3224194..3224988 (-) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain SEM-9     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3219194..3229988
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CAH07_RS16865 (CAH07_16680) ephM 3220037..3220897 (-) 861 WP_014479220.1 epoxide hydrolase EphM -
  CAH07_RS16870 (CAH07_16685) spdL 3220899..3221216 (-) 318 WP_021481164.1 SdpC immunity protein SpdL -
  CAH07_RS16875 (CAH07_16690) yfhK 3221301..3221819 (-) 519 WP_029317456.1 SH3 domain-containing protein -
  CAH07_RS16880 (CAH07_16695) yfhJ 3221964..3222233 (-) 270 WP_003243789.1 YfhJ family protein -
  CAH07_RS16885 (CAH07_16700) sspK 3222358..3222510 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  CAH07_RS16890 (CAH07_16705) yfhI 3222542..3223735 (-) 1194 WP_029317457.1 MFS transporter -
  CAH07_RS16895 (CAH07_16710) yfhH 3223878..3224192 (-) 315 WP_003244592.1 YfhH family protein -
  CAH07_RS16900 (CAH07_16715) recX 3224194..3224988 (-) 795 WP_003243354.1 recombination regulator RecX Regulator
  CAH07_RS16905 (CAH07_16720) yfhF 3225077..3225988 (+) 912 WP_029317458.1 TIGR01777 family oxidoreductase -
  CAH07_RS16910 (CAH07_16725) yfhE 3226043..3226153 (+) 111 WP_003223230.1 YfhE family protein -
  CAH07_RS16915 (CAH07_16730) yfhD 3226220..3226411 (+) 192 WP_003233561.1 YfhD family protein -
  CAH07_RS16920 (CAH07_16735) yfhC 3226450..3227034 (-) 585 WP_003243940.1 nitroreductase -
  CAH07_RS16925 (CAH07_16740) yfhB 3227122..3228003 (-) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  CAH07_RS16930 (CAH07_16745) sxzA 3228118..3229149 (-) 1032 WP_029317459.1 iron ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=228421 CAH07_RS16900 WP_003243354.1 3224194..3224988(-) (recX) [Bacillus subtilis strain SEM-9]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=228421 CAH07_RS16900 WP_003243354.1 3224194..3224988(-) (recX) [Bacillus subtilis strain SEM-9]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTTATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment