Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   CAH07_RS15370 Genome accession   NZ_CP021123
Coordinates   2942843..2943034 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain SEM-9     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2937843..2948034
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CAH07_RS15345 (CAH07_15165) appD 2938177..2939163 (-) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -
  CAH07_RS15350 (CAH07_15170) yjaZ 2939355..2940140 (-) 786 WP_069322523.1 DUF2268 domain-containing protein -
  CAH07_RS15355 (CAH07_15175) fabF 2940216..2941457 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  CAH07_RS15360 (CAH07_15180) fabH 2941480..2942418 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  CAH07_RS15365 (CAH07_15185) yjzB 2942583..2942813 (+) 231 WP_080265337.1 spore coat protein YjzB -
  CAH07_RS15370 (CAH07_15190) comZ 2942843..2943034 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  CAH07_RS15375 (CAH07_15195) med 2943049..2944002 (-) 954 WP_014476425.1 transcriptional regulator Med Regulator
  CAH07_RS15380 (CAH07_15200) - 2944092..2944649 (-) 558 WP_101172488.1 hypothetical protein -
  CAH07_RS15385 (CAH07_15205) - 2944731..2945465 (-) 735 WP_032721340.1 hypothetical protein -
  CAH07_RS15390 (CAH07_15210) yjzD 2945714..2945899 (+) 186 WP_003245236.1 DUF2929 domain-containing protein -
  CAH07_RS15395 (CAH07_15215) yjzC 2945946..2946125 (-) 180 WP_003245356.1 YjzC family protein -
  CAH07_RS15400 (CAH07_15220) argF 2946211..2947170 (-) 960 WP_014476421.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=228412 CAH07_RS15370 WP_003224559.1 2942843..2943034(-) (comZ) [Bacillus subtilis strain SEM-9]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=228412 CAH07_RS15370 WP_003224559.1 2942843..2943034(-) (comZ) [Bacillus subtilis strain SEM-9]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment