Detailed information NTG0228143

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ALFP_RS14420
• Genome accession: NZ_CP021079
• Coordinates: 3131288..3132340 (-)
• Length: 350 a.a.
• NCBI ID: WP_311220206.1
• Uniprot ID: -
• Organism: Alcaligenes faecalis strain P156
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3126288..3137340

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ALFP_RS14395 (ALFP_2894)	nusB	3126386..3126871 (-)	486	WP_009454782.1	transcription antitermination factor NusB	-
ALFP_RS14400 (ALFP_2895)	ribH	3126855..3127373 (-)	519	WP_042488798.1	6,7-dimethyl-8-ribityllumazine synthase	-
ALFP_RS14405 (ALFP_2896)	ribBA	3127388..3128554 (-)	1167	WP_042488800.1	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	-
ALFP_RS14410 (ALFP_2897)	-	3128670..3129497 (+)	828	WP_045931249.1	IclR family transcriptional regulator	-
ALFP_RS14415 (ALFP_2898)	-	3129617..3131146 (+)	1530	WP_063691417.1	CYTH and CHAD domain-containing protein	-
ALFP_RS14420 (ALFP_2899)	pilA	3131288..3132340 (-)	1053	WP_311220206.1	signal recognition particle-docking protein FtsY	Machinery gene
ALFP_RS14425 (ALFP_2900)	rsmD	3132840..3133469 (+)	630	WP_045931251.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ALFP_RS14430 (ALFP_2901)	coaD	3133490..3133996 (+)	507	WP_063691415.1	pantetheine-phosphate adenylyltransferase	-
ALFP_RS14435 (ALFP_2902)	-	3134082..3134339 (+)	258	WP_009454772.1	YfhL family 4Fe-4S dicluster ferredoxin	-
ALFP_RS14440 (ALFP_2903)	-	3134410..3134802 (-)	393	WP_081251476.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 36823.37 Da
• Isoelectric Point: 5.1158

>NTDB_id=228143 ALFP_RS14420 WP_311220206.1 3131288..3132340(-) (pilA) [Alcaligenes faecalis strain P156]
MPQPEPEVPPTPEPEPQPETVPVPAPAPQPEPAPAPEPEAAAPVVKTSWMSRLKQGLSRTGQSLSSLFVGAKVDETLFEE
LEDALLMADAGVEATEKLITALRARVRKEKVSDAAQVKQILCDILTDHLKPLEKSFPLESSKPLVVMIAGVNGAGKTTSI
GKLAHTFQEQGAKVLLAAGDTFRAAAREQLIEWGTRNNVSVIAQDGGDPAAVAFDAVHAGRARDMGVVMVDTAGRLPTQL
HLMEELKKIKRVIGKADGQAPHEILLVVDGNTGQNAISQIRAFDAALGLTGLVVTKLDGTAKGGTLAAVAACAQGVRPIP
VYWIGVGEGMQDLQAFVAREFASALLGMNA

Nucleotide

• Length: 1053 bp

>NTDB_id=228143 ALFP_RS14420 WP_311220206.1 3131288..3132340(-) (pilA) [Alcaligenes faecalis strain P156]
GTGCCGCAGCCAGAACCCGAGGTGCCGCCGACTCCTGAACCGGAGCCACAGCCAGAGACTGTTCCCGTTCCCGCACCAGC
GCCCCAGCCTGAGCCAGCTCCGGCCCCAGAGCCAGAAGCCGCCGCACCTGTGGTGAAAACCTCCTGGATGTCCCGCCTGA
AACAGGGCTTGTCGCGTACAGGACAGAGCCTGAGCAGCCTGTTTGTCGGTGCCAAGGTTGATGAAACACTGTTCGAGGAA
CTGGAAGATGCCTTGCTGATGGCAGATGCGGGCGTTGAGGCTACCGAGAAACTGATTACCGCCTTGCGTGCCCGTGTTCG
CAAGGAAAAAGTCAGTGATGCGGCTCAGGTCAAACAAATCTTGTGCGACATCCTGACTGACCACTTGAAGCCCTTGGAGA
AATCGTTCCCTCTGGAGTCGAGCAAGCCGCTGGTTGTCATGATTGCCGGGGTGAATGGTGCAGGTAAAACCACGTCTATC
GGTAAATTGGCCCACACCTTCCAGGAGCAGGGCGCAAAAGTCTTGCTGGCCGCCGGCGATACCTTCCGTGCTGCGGCTCG
TGAACAGCTGATTGAGTGGGGCACCCGCAATAACGTCAGCGTTATTGCTCAGGATGGTGGCGACCCCGCCGCCGTGGCTT
TTGATGCGGTACATGCAGGCCGTGCACGTGATATGGGTGTGGTCATGGTGGACACTGCCGGTCGCTTACCGACTCAGCTG
CACCTGATGGAAGAACTTAAGAAGATCAAGCGTGTGATTGGCAAGGCCGATGGCCAGGCTCCCCATGAAATTCTCTTGGT
TGTAGACGGCAACACCGGCCAGAACGCCATTTCCCAGATCCGTGCGTTTGATGCGGCCTTGGGGCTGACTGGTCTGGTTG
TCACCAAGCTGGACGGTACAGCCAAAGGCGGTACGCTGGCTGCCGTTGCAGCCTGTGCGCAAGGCGTACGTCCTATCCCG
GTTTACTGGATTGGCGTGGGCGAGGGTATGCAGGATCTGCAGGCTTTTGTGGCACGAGAGTTCGCGTCGGCCTTGTTGGG
CATGAACGCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (61-125)

• SRP54-type protein, GTPase domain (SRP54) (144-347)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	58.824	87.429	0.514