Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   CAB88_RS05495 Genome accession   NZ_CP021061
Coordinates   1031719..1031895 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus thuringiensis strain ATCC 10792     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1026719..1036895
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CAB88_RS05475 (CAB88_05455) clpC 1027050..1029650 (+) 2601 WP_000365411.1 ATP-dependent chaperone ClpB Regulator
  CAB88_RS05480 (CAB88_05460) - 1029689..1029871 (-) 183 WP_001211116.1 YjzD family protein -
  CAB88_RS05485 (CAB88_05465) - 1030028..1030762 (+) 735 WP_000028688.1 hydrolase -
  CAB88_RS05490 (CAB88_05470) - 1030792..1031664 (+) 873 WP_000487723.1 NAD(P)-dependent oxidoreductase -
  CAB88_RS05495 (CAB88_05475) comZ 1031719..1031895 (+) 177 WP_001986215.1 ComZ family protein Regulator
  CAB88_RS05500 (CAB88_05480) fabH 1032127..1033059 (+) 933 WP_001100533.1 beta-ketoacyl-ACP synthase III -
  CAB88_RS05505 (CAB88_05485) fabF 1033091..1034329 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  CAB88_RS05510 (CAB88_05490) - 1034436..1035224 (+) 789 WP_000513281.1 DUF2268 domain-containing protein -
  CAB88_RS05515 (CAB88_05495) - 1035369..1036115 (+) 747 WP_000966129.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=228059 CAB88_RS05495 WP_001986215.1 1031719..1031895(+) (comZ) [Bacillus thuringiensis strain ATCC 10792]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=228059 CAB88_RS05495 WP_001986215.1 1031719..1031895(+) (comZ) [Bacillus thuringiensis strain ATCC 10792]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAAGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAAGCTTATGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment