Detailed information NTG0227985

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BL14DL4_RS18385
• Genome accession: NZ_CP026673
• Coordinates: 3508150..3509268 (+)
• Length: 372 a.a.
• NCBI ID: WP_009328956.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain 14ADL4
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3503150..3514268

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BL14DL4_RS18360 (BL14DL4_03649)	-	3503350..3504855 (+)	1506	WP_025808244.1	coproporphyrinogen III oxidase	-
BL14DL4_RS18365 (BL14DL4_03650)	-	3504937..3506148 (-)	1212	WP_003180218.1	cation:proton antiporter	-
BL14DL4_RS18370 (BL14DL4_03651)	-	3506155..3506652 (-)	498	WP_003180220.1	cation:proton antiporter regulatory subunit	-
BL14DL4_RS18375 (BL14DL4_03652)	-	3506717..3507046 (-)	330	WP_016886161.1	hypothetical protein	-
BL14DL4_RS18380 (BL14DL4_03653)	-	3507247..3508023 (+)	777	WP_011197707.1	enoyl-CoA hydratase	-
BL14DL4_RS18385 (BL14DL4_03654)	rapC	3508150..3509268 (+)	1119	WP_009328956.1	Rap family tetratricopeptide repeat protein	Regulator
BL14DL4_RS22955 (BL14DL4_03655)	-	3509258..3509395 (+)	138	WP_016886158.1	hypothetical protein	-
BL14DL4_RS18390 (BL14DL4_03656)	-	3509400..3509678 (+)	279	WP_003180226.1	hypothetical protein	-
BL14DL4_RS18395 (BL14DL4_03657)	-	3509753..3509938 (-)	186	WP_003180228.1	YhzD family protein	-
BL14DL4_RS18400 (BL14DL4_03658)	-	3510056..3510952 (+)	897	WP_003180230.1	ABC transporter ATP-binding protein	-
BL14DL4_RS18405 (BL14DL4_03659)	-	3510945..3512213 (+)	1269	WP_003180232.1	ABC transporter permease	-
BL14DL4_RS18410 (BL14DL4_03660)	-	3512333..3513559 (+)	1227	WP_009328954.1	exonuclease SbcCD subunit D	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 43356.03 Da
• Isoelectric Point: 5.5287

>NTDB_id=227985 BL14DL4_RS18385 WP_009328956.1 3508150..3509268(+) (rapC) [Bacillus licheniformis strain 14ADL4]
MKQKIPSEYVARKLNDWYNAIRKNQIAASESLKAEILNDFQDMEENQDVLLYYSLLEFRHKLMLSYLKPKETENIEKNLR
DLEEKEDQMTGLLNYYYWFFKGMYEFKQKRFVKAIGCYKTAEQKVSALEDEVEKAEFYYKLAEIYYYINQRYLSINYATL
ASDIFNRYETLKEKKIFCDFIIAGNWVESMTYGPALKSLANALEDARKIKNSHLTAAAHFNLGNCYFHQESYREASDHME
SALSIFEQESSSYIPKVLYNLMYVRLKQGNHAGAAACYEKGIRSAASLGDEEHAAKLNILCGLYLDGGDQKAVENGFDYL
ESNHLYAAVEELALDAAQYYNQIERLKDSIFYYEKCAQASRKIKRGDALYES

Nucleotide

• Length: 1119 bp

>NTDB_id=227985 BL14DL4_RS18385 WP_009328956.1 3508150..3509268(+) (rapC) [Bacillus licheniformis strain 14ADL4]
TTGAAACAGAAGATTCCATCTGAATACGTTGCTAGAAAGCTGAATGATTGGTACAACGCCATTCGGAAAAATCAGATCGC
CGCCAGTGAATCATTGAAAGCGGAAATTTTAAATGATTTTCAAGACATGGAAGAAAATCAGGACGTCCTGCTCTACTATT
CGCTGCTTGAATTCAGGCATAAACTGATGCTCAGCTATTTGAAACCGAAAGAGACTGAAAATATTGAAAAAAACCTCCGC
GACTTAGAAGAAAAAGAAGACCAAATGACGGGTTTATTAAACTATTATTACTGGTTTTTTAAAGGGATGTATGAGTTCAA
ACAAAAGCGGTTCGTCAAAGCAATCGGCTGCTATAAAACGGCTGAACAAAAAGTCAGCGCACTGGAAGACGAGGTTGAAA
AAGCGGAATTTTATTATAAGCTTGCGGAAATCTACTATTATATCAACCAGAGATACCTGTCGATCAACTATGCGACGCTA
GCTTCCGACATTTTTAACCGGTATGAAACGCTAAAAGAAAAAAAGATTTTCTGCGATTTTATCATTGCCGGTAATTGGGT
TGAATCGATGACATACGGACCCGCGCTGAAAAGCCTGGCCAATGCGCTTGAAGACGCCAGGAAAATCAAAAACAGCCATT
TGACGGCAGCCGCTCATTTTAATTTGGGAAATTGCTATTTCCACCAAGAATCGTACCGGGAAGCCTCAGATCATATGGAG
AGCGCCCTTTCCATTTTTGAACAGGAAAGTTCATCATATATTCCCAAAGTGCTGTACAACTTGATGTACGTCCGTCTCAA
GCAGGGGAACCATGCCGGAGCTGCCGCCTGTTATGAAAAAGGCATCCGAAGCGCGGCATCGCTCGGGGATGAAGAACACG
CGGCAAAGCTTAACATTCTGTGCGGGCTGTATTTAGACGGAGGGGATCAGAAAGCCGTGGAAAACGGATTTGATTATTTG
GAGTCAAATCATTTATATGCTGCTGTTGAAGAGCTGGCTTTAGATGCAGCCCAGTATTATAATCAAATTGAGCGGCTGAA
AGATTCCATTTTTTACTATGAAAAGTGCGCTCAGGCAAGTCGAAAAATCAAAAGGGGAGATGCGTTGTATGAAAGCTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-248)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.166	100	0.374