Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SPS_RS02020 Genome accession   NC_004606
Coordinates   399711..400436 (+) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes SSI-1     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 394711..405436
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPS_RS01990 (SPs0358) - 394890..396350 (+) 1461 WP_011106621.1 NCS2 family permease -
  SPS_RS01995 (SPs0359) tsaE 396504..396965 (+) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SPS_RS02000 (SPs0360) - 396940..397464 (+) 525 WP_002983369.1 GNAT family N-acetyltransferase -
  SPS_RS02005 (SPs0361) brpA 397473..398756 (+) 1284 WP_002994335.1 biofilm formation/cell division transcriptional regulator BrpA -
  SPS_RS02010 (SPs0362) - 398867..399223 (-) 357 WP_002988657.1 hypothetical protein -
  SPS_RS02015 (SPs0363) - 399220..399639 (-) 420 WP_002983376.1 HIT family protein -
  SPS_RS02020 (SPs0364) pptA 399711..400436 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  SPS_RS02025 (SPs0365) - 400439..401473 (+) 1035 WP_010922583.1 ABC transporter permease -
  SPS_RS02030 (SPs0366) ccrZ 401537..402328 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  SPS_RS02035 (SPs0367) trmB 402328..402963 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SPS_RS02045 rimP 403222..403758 (+) 537 WP_011054929.1 ribosome maturation factor RimP -
  SPS_RS02050 (SPs0369) nusA 403933..405090 (+) 1158 WP_002994325.1 transcription termination factor NusA -
  SPS_RS02055 (SPs0370) rnpM 405106..405402 (+) 297 WP_002983486.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=22794 SPS_RS02020 WP_002983379.1 399711..400436(+) (pptA) [Streptococcus pyogenes SSI-1]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=22794 SPS_RS02020 WP_002983379.1 399711..400436(+) (pptA) [Streptococcus pyogenes SSI-1]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment