Detailed information    

insolico Bioinformatically predicted

Overview

Name   irvR   Type   Regulator
Locus tag   SPYM3_RS05215 Genome accession   NC_004070
Coordinates   1015882..1016670 (+) Length   262 a.a.
NCBI ID   WP_011054594.1    Uniprot ID   A0A0H2UVP7
Organism   Streptococcus pyogenes MGAS315     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1010882..1021670
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPYM3_RS05165 (SpyM3_0964) - 1011508..1011822 (-) 315 WP_011054583.1 helix-turn-helix transcriptional regulator -
  SPYM3_RS10635 (SpyM3_0965) - 1011838..1011972 (-) 135 WP_002995985.1 hypothetical protein -
  SPYM3_RS05170 (SpyM3_0966) - 1011969..1012265 (-) 297 WP_011054584.1 MerR family transcriptional regulator -
  SPYM3_RS05175 (SpyM3_0967) - 1012343..1012528 (-) 186 WP_011054585.1 helix-turn-helix domain-containing protein -
  SPYM3_RS05180 (SpyM3_0968) - 1012695..1012934 (+) 240 WP_011054586.1 hypothetical protein -
  SPYM3_RS05185 (SpyM3_0969) - 1013085..1013294 (+) 210 WP_002984292.1 hypothetical protein -
  SPYM3_RS05195 (SpyM3_0971) - 1013510..1013749 (-) 240 WP_011054588.1 helix-turn-helix domain-containing protein -
  SPYM3_RS05200 (SpyM3_0972) - 1013823..1014209 (+) 387 WP_011054589.1 hypothetical protein -
  SPYM3_RS05205 (SpyM3_0973) - 1014198..1014404 (-) 207 WP_011054590.1 hypothetical protein -
  SPYM3_RS05210 (SpyM3_0974) - 1014461..1015240 (+) 780 WP_011054591.1 hypothetical protein -
  SPYM3_RS09925 (SpyM3_0976) - 1015374..1015520 (-) 147 WP_011054593.1 hypothetical protein -
  SPYM3_RS05215 (SpyM3_0977) irvR 1015882..1016670 (+) 789 WP_011054594.1 LexA family transcriptional regulator Regulator
  SPYM3_RS05220 - 1016680..1016985 (+) 306 WP_011106738.1 membrane protein -
  SPYM3_RS05225 (SpyM3_0978) - 1017105..1018193 (+) 1089 WP_011054595.1 site-specific integrase -
  SPYM3_RS05230 (SpyM3_0979) - 1018556..1019176 (+) 621 WP_011054596.1 DUF3862 domain-containing protein -

Sequence

Protein


Download         Length: 262 a.a.        Molecular weight: 29978.19 Da        Isoelectric Point: 9.0535

>NTDB_id=22793 SPYM3_RS05215 WP_011054594.1 1015882..1016670(+) (irvR) [Streptococcus pyogenes MGAS315]
MARGRGKLTPQDEEYKKIISAKINSLLLENNLKQGHLADALEIPRSSFNEYVKGNSLPNPGNVQKIADYFGLMKSDIDPR
FAPRKKNHELKIPTSPLVKKITTTVVELKVPRKQKVLDFATEQLKEQKNKITSIEKKLYEYKVYEKLSAGTGYGYFGDGN
YDTVFYDEELDYDFASWVFGDSMEPTYLNGEVVLIKQTGFDYEGGIYAVEWDGQTYIKKVYREKGGLRLVSLNKKYNDKF
APFSEGPRVIGEIVGNFMPKEY

Nucleotide


Download         Length: 789 bp        

>NTDB_id=22793 SPYM3_RS05215 WP_011054594.1 1015882..1016670(+) (irvR) [Streptococcus pyogenes MGAS315]
ATGGCAAGAGGACGAGGGAAATTAACACCTCAAGACGAGGAATACAAAAAGATAATTTCTGCTAAAATTAACAGTTTATT
GCTAGAAAACAATTTAAAACAAGGACATTTAGCTGATGCATTGGAAATTCCACGAAGTAGTTTTAATGAATATGTCAAAG
GAAATTCCTTACCTAATCCTGGTAACGTTCAAAAGATAGCTGATTATTTCGGGTTAATGAAGTCTGATATAGATCCTAGA
TTTGCACCTCGTAAGAAAAATCACGAACTCAAAATCCCTACTTCTCCACTCGTCAAAAAAATAACCACAACAGTTGTAGA
ATTAAAGGTTCCTCGTAAACAAAAAGTTTTAGACTTTGCAACAGAACAATTGAAAGAGCAAAAAAACAAAATTACTTCGA
TAGAGAAAAAACTATATGAATACAAAGTCTATGAGAAACTTTCCGCAGGTACAGGTTATGGATATTTTGGTGATGGGAAC
TATGATACTGTTTTTTACGACGAAGAATTAGATTACGATTTTGCCTCTTGGGTTTTTGGTGATTCTATGGAACCAACTTA
TCTGAATGGTGAGGTTGTGCTTATAAAACAAACTGGCTTTGATTATGAAGGTGGCATCTATGCCGTAGAGTGGGACGGAC
AAACCTATATTAAGAAAGTTTACAGAGAAAAGGGTGGCTTGCGCCTTGTGTCCTTAAATAAAAAATACAATGACAAGTTT
GCTCCTTTTAGTGAAGGCCCTCGTGTAATAGGGGAAATTGTCGGTAACTTTATGCCTAAAGAGTACTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(168-254)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UVP7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  irvR Streptococcus mutans UA159

38.487

100

0.447