Detailed information NTG0227900

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BL14DL4_RS03475
• Genome accession: NZ_CP026673
• Coordinates: 617927..619057 (-)
• Length: 376 a.a.
• NCBI ID: WP_009327959.1
• Uniprot ID: Q65HV9
• Organism: Bacillus licheniformis strain 14ADL4
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 612927..624057

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BL14DL4_RS03455 (BL14DL4_00697)	-	614116..614460 (-)	345	WP_003183123.1	hypothetical protein	-
BL14DL4_RS03460 (BL14DL4_00698)	-	614723..616909 (-)	2187	WP_003183125.1	RNA ligase	-
BL14DL4_RS03465 (BL14DL4_00699)	-	617036..617473 (-)	438	WP_003183127.1	Hsp20/alpha crystallin family protein	-
BL14DL4_RS03470 (BL14DL4_00700)	-	617632..617937 (-)	306	WP_003183128.1	hypothetical protein	-
BL14DL4_RS03475 (BL14DL4_00701)	rapC	617927..619057 (-)	1131	WP_009327959.1	Rap family tetratricopeptide repeat protein	Regulator
BL14DL4_RS03480 (BL14DL4_00702)	-	619288..619725 (-)	438	WP_003183133.1	peptidylprolyl isomerase	-
BL14DL4_RS03485 (BL14DL4_00703)	-	619855..620958 (+)	1104	WP_003183136.1	DUF1002 domain-containing protein	-
BL14DL4_RS03490 (BL14DL4_00704)	-	620955..621815 (-)	861	WP_003183139.1	poly-gamma-glutamate hydrolase family protein	-
BL14DL4_RS03495 (BL14DL4_00705)	lysA	622054..623373 (-)	1320	WP_003183141.1	diaminopimelate decarboxylase	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44264.11 Da
• Isoelectric Point: 4.7199

>NTDB_id=227900 BL14DL4_RS03475 WP_009327959.1 617927..619057(-) (rapC) [Bacillus licheniformis strain 14ADL4]
MSVKIPSTAVGVKINDWYNAIRKFNVTDAEMLKAEIEREISQMEEDQDLLLYYALMEFRHRIMLDYVKPLEEGETPPDFS
EILKDIEDEQGKLTGLLEYYFNFFRGMYEYKNHDYIKAISFYRRAEKKLLHVEDEIERAEFHFKMAEVFYHMKQSHVSMN
YALQAIETYQAHETYTVRRIQCEFVIAGNYDDLESNEKALSHLEKALKLSQQEGQLILEGHTYYNLGNCYYKMGDFDQAA
EYFNRAAAIYQEESSDILPKAFFSLALAYFKLKQLEKADDALNKGIDIARRSDDAIYLSKFHFLKALYVDDDGRAPMLET
FQLLGSKKMYPDIEDLALEAAEYYNEIGRLSDSVYFYQTVFSARKQMKKGDWSYEI

Nucleotide

• Length: 1131 bp

>NTDB_id=227900 BL14DL4_RS03475 WP_009327959.1 617927..619057(-) (rapC) [Bacillus licheniformis strain 14ADL4]
GTGAGCGTAAAAATCCCATCGACGGCAGTCGGCGTAAAAATTAATGACTGGTATAACGCGATACGTAAATTCAACGTCAC
GGACGCCGAAATGCTGAAGGCAGAAATTGAGCGCGAAATTTCTCAAATGGAAGAGGATCAAGACTTATTATTGTATTACG
CCTTAATGGAATTCAGACACAGAATCATGCTTGATTACGTAAAACCTTTGGAAGAAGGCGAAACCCCGCCTGACTTTTCT
GAAATATTAAAAGATATCGAAGATGAACAAGGAAAGCTGACAGGCCTGCTCGAATATTATTTTAACTTTTTTAGAGGGAT
GTATGAATATAAAAACCATGATTATATTAAAGCGATCTCTTTTTACAGGCGCGCCGAAAAAAAGCTGCTGCACGTCGAGG
ACGAAATAGAGAGAGCCGAGTTTCATTTTAAAATGGCTGAAGTGTTTTATCATATGAAACAGAGCCATGTGTCGATGAAC
TATGCGCTTCAAGCGATTGAAACCTATCAGGCGCATGAAACCTACACGGTTCGGAGAATCCAATGCGAGTTCGTCATCGC
AGGGAACTATGACGATTTAGAGTCGAATGAAAAAGCGCTGTCACATCTTGAAAAGGCGCTGAAGCTTTCACAGCAAGAAG
GCCAGCTCATATTGGAAGGACACACCTATTACAATTTGGGAAACTGCTATTATAAGATGGGGGATTTCGATCAGGCAGCC
GAGTACTTCAACAGGGCTGCTGCGATTTATCAAGAAGAGTCATCAGATATTCTTCCAAAAGCGTTTTTCAGTCTTGCACT
TGCATATTTCAAGTTGAAGCAGCTGGAAAAGGCGGATGACGCGTTAAACAAAGGAATTGACATCGCCCGCCGATCAGACG
ATGCGATCTACCTTTCAAAATTTCATTTTTTAAAAGCTTTGTATGTTGATGATGACGGCAGGGCTCCAATGCTGGAGACA
TTTCAGCTGCTCGGGTCAAAAAAGATGTATCCCGATATTGAGGACTTGGCATTGGAAGCAGCTGAATACTATAATGAAAT
TGGGCGCTTGAGCGACTCTGTTTATTTCTATCAAACGGTATTCAGTGCTCGAAAACAAATGAAAAAAGGGGACTGGTCGT
ATGAAATCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_8) (260-290)

• Tetratricopeptide repeat (TPR_12) (190-252)

3D structure

• AlphaFold DB: Q65HV9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	47.745	100	0.479
rapF	Bacillus subtilis subsp. subtilis str. 168	44.619	100	0.452