Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   B6257_RS17005 Genome accession   NZ_CP021011
Coordinates   3270181..3270645 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain GFP-2     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3265181..3275645
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B6257_RS16985 (B6257_16890) - 3265661..3267481 (+) 1821 WP_003154628.1 PAS domain-containing protein -
  B6257_RS16990 (B6257_16895) - 3267457..3268676 (-) 1220 Protein_3278 aminotransferase A -
  B6257_RS20040 - 3268877..3269038 (-) 162 WP_007409608.1 hypothetical protein -
  B6257_RS17000 (B6257_16905) cheV 3269227..3270138 (+) 912 WP_003154623.1 chemotaxis protein CheV -
  B6257_RS17005 (B6257_16910) kre 3270181..3270645 (-) 465 WP_003154622.1 YkyB family protein Regulator
  B6257_RS17010 (B6257_16915) - 3270768..3272060 (-) 1293 WP_071391909.1 MFS transporter -
  B6257_RS17015 (B6257_16920) - 3272136..3272630 (-) 495 WP_088037173.1 L,D-transpeptidase family protein -
  B6257_RS17020 (B6257_16925) - 3272705..3273568 (-) 864 WP_071391907.1 metallophosphoesterase -
  B6257_RS17025 (B6257_16930) fadH 3273712..3274476 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  B6257_RS17030 (B6257_16935) - 3274587..3275135 (+) 549 WP_101562968.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=227842 B6257_RS17005 WP_003154622.1 3270181..3270645(-) (kre) [Bacillus velezensis strain GFP-2]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=227842 B6257_RS17005 WP_003154622.1 3270181..3270645(-) (kre) [Bacillus velezensis strain GFP-2]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment