Detailed information NTG0227703

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: XcfCFBP4885P_RS06305
• Genome accession: NZ_CP020992
• Coordinates: 1440440..1441498 (+)
• Length: 352 a.a.
• NCBI ID: WP_011348458.1
• Uniprot ID: -
• Organism: Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1435440..1446498

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
XcfCFBP4885P_RS06295 (XcfCFBP4885P_13780)	-	1436850..1437500 (-)	651	WP_022558570.1	hypothetical protein	-
XcfCFBP4885P_RS06300 (XcfCFBP4885P_13775)	-	1437801..1440227 (-)	2427	WP_022558571.1	penicillin-binding protein 1A	-
XcfCFBP4885P_RS06305 (XcfCFBP4885P_13770)	comM	1440440..1441498 (+)	1059	WP_011348458.1	pilus assembly protein PilM	Machinery gene
XcfCFBP4885P_RS06310 (XcfCFBP4885P_13765)	-	1441498..1442280 (+)	783	WP_007974441.1	PilN domain-containing protein	-
XcfCFBP4885P_RS06315 (XcfCFBP4885P_13760)	-	1442277..1442942 (+)	666	WP_007967621.1	type 4a pilus biogenesis protein PilO	-
XcfCFBP4885P_RS06320 (XcfCFBP4885P_13755)	-	1442939..1443472 (+)	534	WP_003486179.1	pilus assembly protein PilP	-
XcfCFBP4885P_RS06325 (XcfCFBP4885P_13750)	-	1443492..1445438 (+)	1947	WP_033480966.1	type IV pilus secretin PilQ family protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37606.21 Da
• Isoelectric Point: 4.3924

>NTDB_id=227703 XcfCFBP4885P_RS06305 WP_011348458.1 1440440..1441498(+) (comM) [Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885]
MGLLPKSQSPLIGVDISSTAVKLLQLSRSGNRFRVEHYAVEPLPPNAVVEKNIVEVEAVGEAIRRAINRSGSKAKNAAAA
VAGSAVITKLIPMPADLDDSDLEAQVELEATNYIPYPIEEVNLDFEVLGPMPNSPDMVQVLLAASRSENVELRQSALELG
GLTAKVMDVEAFAVENAFALVASELPVAADAVVALVDIGATMTTLSVLRSGRSLYSREQVFGGKQLTDEVMRRYGLTYEE
AGLAKRQGGLPESYEVEVLEPFKEATVQQISRLLQFFYAGSEFNRVDCIVLAGGCAALARLPEMVEEQLGVTTVVANPLA
QMTLGPKVQAHALALDAPALMIATGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=227703 XcfCFBP4885P_RS06305 WP_011348458.1 1440440..1441498(+) (comM) [Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885]
GTGGGGCTTTTACCCAAGAGTCAGTCGCCACTGATTGGTGTCGACATTAGTTCGACTGCCGTGAAGCTCTTGCAGCTATC
GCGCAGCGGGAACCGTTTCCGCGTGGAACATTACGCGGTAGAACCATTGCCGCCGAATGCGGTCGTGGAAAAGAACATCG
TCGAAGTGGAAGCGGTGGGCGAAGCCATTCGCCGCGCCATCAACCGTTCCGGCAGCAAGGCCAAGAACGCGGCAGCTGCC
GTGGCAGGGTCGGCGGTGATCACCAAGTTGATCCCGATGCCGGCCGATCTGGACGATAGCGACCTGGAGGCCCAGGTCGA
ACTGGAAGCCACCAATTACATTCCGTACCCGATCGAGGAAGTGAATCTCGATTTCGAGGTGCTGGGCCCGATGCCCAATA
GCCCGGACATGGTGCAGGTGCTGCTGGCCGCCTCGCGTTCGGAGAATGTGGAACTGCGCCAGTCGGCGCTGGAACTCGGC
GGCCTGACCGCCAAGGTAATGGACGTGGAGGCCTTTGCGGTCGAAAACGCCTTCGCCCTGGTTGCCAGCGAATTGCCGGT
GGCCGCCGATGCGGTGGTGGCGCTGGTGGATATCGGCGCGACCATGACCACGCTGAGCGTGCTGCGCTCCGGTCGCAGTC
TGTATAGCCGCGAGCAGGTGTTCGGCGGCAAGCAGCTCACTGACGAAGTGATGCGCCGTTATGGACTGACCTACGAAGAG
GCTGGCCTTGCCAAGCGCCAGGGCGGCCTGCCGGAAAGCTACGAGGTCGAAGTGCTGGAGCCGTTCAAGGAAGCCACGGT
GCAGCAGATCAGCCGTCTGCTGCAGTTCTTCTATGCGGGCAGTGAGTTCAACCGCGTCGACTGCATCGTGCTGGCCGGCG
GTTGCGCCGCGCTGGCGCGCCTGCCGGAGATGGTGGAAGAGCAGCTCGGTGTGACCACGGTCGTTGCAAATCCGCTTGCC
CAGATGACGCTTGGCCCGAAGGTTCAGGCCCATGCGCTGGCGCTGGATGCGCCTGCACTGATGATCGCCACCGGCCTGGC
CCTGAGGAGCTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (13-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter baylyi ADP1	51.282	99.716	0.511
comM	Acinetobacter nosocomialis M2	51.136	100	0.511
pilM	Acinetobacter baumannii D1279779	50.852	100	0.509
pilM	Legionella pneumophila strain ERS1305867	47.293	99.716	0.472