Detailed information NTG0227432

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: C4E05_RS03090
• Genome accession: NZ_CP026580
• Coordinates: 181882..182865 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain WCHEC005237
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 176882..187865

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C4E05_RS03070 (C4E05_03150)	dppA	178025..179632 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
C4E05_RS26370	-	179666..179776 (-)	111	Protein_169	hypothetical protein	-
C4E05_RS03080 (C4E05_03155)	dppB	179940..180959 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
C4E05_RS03085 (C4E05_03160)	dppC	180969..181871 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
C4E05_RS03090 (C4E05_03165)	amiE	181882..182865 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
C4E05_RS03095 (C4E05_03170)	amiE	182862..183866 (+)	1005	WP_039023208.1	dipeptide ABC transporter ATP-binding subunit DppF	Regulator
C4E05_RS03100 (C4E05_03175)	yhjV	183896..185167 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
C4E05_RS03110 (C4E05_03190)	ldrD	185643..185750 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
C4E05_RS03115 (C4E05_03195)	bcsG	185837..187516 (-)	1680	WP_000191619.1	cellulose biosynthesis protein BcsG	-
C4E05_RS03120 (C4E05_03200)	bcsF	187513..187704 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=227432 C4E05_RS03090 WP_001196486.1 181882..182865(+) (amiE) [Escherichia coli strain WCHEC005237]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=227432 C4E05_RS03090 WP_001196486.1 181882..182865(+) (amiE) [Escherichia coli strain WCHEC005237]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404