Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   MW_RS11205 Genome accession   NC_003923
Coordinates   2213001..2213471 (+) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus subsp. aureus MW2     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2208001..2218471
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MW_RS11185 (MW2054) coaW 2208310..2209113 (+) 804 WP_000862727.1 type II pantothenate kinase -
  MW_RS11190 (MW2055) - 2209243..2209914 (-) 672 WP_000120549.1 DUF2750 domain-containing protein -
  MW_RS11195 (MW2056) ldmS 2210313..2211506 (-) 1194 WP_000183726.1 L-aspartate--L-methionine ligase LdmS -
  MW_RS11200 (MW2057) - 2211506..2212690 (-) 1185 WP_001291500.1 M20 family metallopeptidase -
  MW_RS11205 (MW2058) luxS 2213001..2213471 (+) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  MW_RS11210 (MW2059) - 2213623..2213973 (-) 351 WP_001024030.1 DoxX family protein -
  MW_RS11215 (MW2060) - 2213987..2215288 (-) 1302 WP_001242310.1 pyrimidine-nucleoside phosphorylase -
  MW_RS11225 (MW2061) deoC 2215569..2216231 (-) 663 WP_000555148.1 deoxyribose-phosphate aldolase -
  MW_RS11230 (MW2062) deoD 2216546..2217256 (+) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  MW_RS11235 (MW2063) - 2217377..2217820 (-) 444 WP_000070866.1 Dps family protein -
  MW_RS11240 (MW2064) - 2218020..2218433 (-) 414 WP_001123300.1 thiol-disulfide oxidoreductase DCC family protein -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=22740 MW_RS11205 WP_000164421.1 2213001..2213471(+) (luxS) [Staphylococcus aureus subsp. aureus MW2]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=22740 MW_RS11205 WP_000164421.1 2213001..2213471(+) (luxS) [Staphylococcus aureus subsp. aureus MW2]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCCG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65329

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404

Multiple sequence alignment