Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   C3K23_RS13820 Genome accession   NZ_CP026490
Coordinates   2973611..2974732 (+) Length   373 a.a.
NCBI ID   WP_023418756.1    Uniprot ID   -
Organism   Streptomyces sp. 604F     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2968611..2979732
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C3K23_RS13805 (C3K23_13995) - 2969402..2971114 (-) 1713 WP_164181217.1 BACON domain-containing protein -
  C3K23_RS13810 (C3K23_14000) - 2971392..2971967 (+) 576 WP_023418758.1 dihydrofolate reductase family protein -
  C3K23_RS13815 (C3K23_14005) radA/sms 2972022..2973440 (+) 1419 WP_023418757.1 DNA repair protein RadA Machinery gene
  C3K23_RS13820 (C3K23_14010) disA 2973611..2974732 (+) 1122 WP_023418756.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  C3K23_RS13825 (C3K23_14015) - 2974815..2975627 (-) 813 WP_239105424.1 hypothetical protein -
  C3K23_RS13830 (C3K23_14020) - 2975982..2976731 (+) 750 WP_037787336.1 phosphatase PAP2 family protein -
  C3K23_RS13835 (C3K23_14025) - 2976844..2977896 (+) 1053 WP_033950752.1 A/G-specific adenine glycosylase -
  C3K23_RS13840 (C3K23_14030) - 2978115..2978654 (+) 540 WP_003948881.1 SigE family RNA polymerase sigma factor -
  C3K23_RS13845 (C3K23_14035) - 2978675..2979343 (+) 669 WP_023422485.1 lipoprotein CseA -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 40201.07 Da        Isoelectric Point: 5.0999

>NTDB_id=227258 C3K23_RS13820 WP_023418756.1 2973611..2974732(+) (disA) [Streptomyces sp. 604F]
MAANDRATAPGKSGGPGADGLMRASLSAVAPGTQLRDGLERILRGNTGGLIVLGWDKTVESMCTGGFVLDVEFSATRLRE
LCKLDGGIVLDKDLTKILRAGVQLVPDPTIPTDETGTRHRTADRVSKQVNFPVVSVSQSMRLIALYVDGQRRVLEDSAAI
LSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVSQRLEMVRRIAAEIAEYVVELGTDGRLLALQLDELIAG
VEPERELVVRDYVPEPTAKRSRTVDEALAELGKLSHTELLELPVVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGAI
IDRLVDHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=227258 C3K23_RS13820 WP_023418756.1 2973611..2974732(+) (disA) [Streptomyces sp. 604F]
GTGGCAGCCAATGACCGGGCAACGGCCCCCGGCAAGTCCGGCGGGCCCGGTGCCGACGGGCTGATGCGTGCCTCGCTGAG
CGCCGTCGCCCCCGGCACCCAGCTGCGGGACGGGCTGGAGCGGATTCTGCGGGGGAACACCGGCGGACTCATCGTGCTCG
GCTGGGACAAGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTGCTGGACGTCGAGTTCTCCGCGACCCGCCTGCGCGAG
CTGTGCAAGCTCGACGGCGGCATCGTCCTCGACAAGGACCTCACCAAGATCCTGCGCGCCGGAGTCCAGCTCGTCCCCGA
CCCGACCATCCCCACCGACGAGACCGGCACCCGGCACCGCACCGCCGACCGCGTCTCCAAGCAGGTCAACTTCCCCGTGG
TCTCGGTCAGCCAGTCGATGCGGCTGATCGCGCTCTACGTGGACGGGCAGCGCAGGGTCCTGGAGGACTCGGCCGCCATC
CTCTCCCGCGCCAACCAGGCCCTCGCCACGCTGGAGCGGTACAAGCTCCGGCTGGACGAGGTGGCCGGCACGCTCTCGGC
GCTGGAGATCGAGGACCTGGTGACGGTCCGCGACGTCACGGCCGTCTCGCAGCGGCTGGAGATGGTCCGCCGGATCGCCG
CCGAGATCGCCGAGTACGTGGTGGAACTGGGCACCGACGGGCGTCTGCTCGCCCTCCAGCTGGACGAGCTGATCGCCGGC
GTCGAGCCCGAACGCGAGCTGGTCGTCCGGGACTACGTGCCGGAGCCCACGGCCAAGCGTTCCCGCACGGTGGACGAGGC
GCTGGCGGAGCTGGGCAAGCTCAGCCACACCGAGCTGCTCGAACTCCCCGTGGTGGCGCGGGCGCTCGGCTACACCGGCT
CGCCGGAGGCGCTGGACTCGGCGGTGTCGCCGCGCGGCTTCCGCCTCCTGGCGAAGGTGCCGCGGCTGCCCGGGGCCATC
ATCGACCGGCTGGTGGACCACTTCGGCGGCCTCCAGAAGCTGCTGGCGGCCAGCGTGGACGACCTCCAGACGGTGGACGG
CGTCGGCGAGGCCCGCGCCCGCAGCGTCCGCGAGGGCCTCTCCCGCCTTGCCGAGTCGTCGATCCTGGAGCGGTACGTCT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.243

92.761

0.429