Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   B9L64_RS20865 Genome accession   NZ_CP020915
Coordinates   4031999..4032463 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain 50-1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 4026999..4037463
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B9L64_RS20845 kinA 4027465..4029285 (+) 1821 WP_003245779.1 sporulation histidine kinase KinA -
  B9L64_RS20850 dapX 4029296..4030477 (-) 1182 WP_003232415.1 aminotransferase A -
  B9L64_RS20855 - 4030679..4030840 (-) 162 WP_003245246.1 hypothetical protein -
  B9L64_RS20860 cheV 4031044..4031955 (+) 912 WP_009967126.1 chemotaxis protein CheV -
  B9L64_RS20865 kre 4031999..4032463 (-) 465 WP_003232406.1 YkyB family protein Regulator
  B9L64_RS20870 ykuC 4032589..4033881 (-) 1293 WP_046380992.1 MFS transporter -
  B9L64_RS20875 ltdD 4033957..4034451 (-) 495 WP_072557193.1 L,D-transpeptidase family protein -
  B9L64_RS20880 ppeE 4034508..4035368 (-) 861 WP_017697271.1 metallophosphoesterase -
  B9L64_RS20885 fadH 4035511..4036275 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=227130 B9L64_RS20865 WP_003232406.1 4031999..4032463(-) (kre) [Bacillus subtilis strain 50-1]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=227130 B9L64_RS20865 WP_003232406.1 4031999..4032463(-) (kre) [Bacillus subtilis strain 50-1]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment