Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   B9L64_RS19385 Genome accession   NZ_CP020915
Coordinates   3763901..3764854 (+) Length   317 a.a.
NCBI ID   WP_003245494.1    Uniprot ID   A0AAE2SG99
Organism   Bacillus subtilis strain 50-1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3758901..3769854
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B9L64_RS19360 argF 3760733..3761692 (+) 960 WP_014479432.1 ornithine carbamoyltransferase -
  B9L64_RS19365 yjzC 3761778..3761957 (+) 180 WP_003245356.1 YjzC family protein -
  B9L64_RS19370 yjzD 3762003..3762188 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  B9L64_RS19375 - 3762437..3763171 (+) 735 WP_014479433.1 hypothetical protein -
  B9L64_RS19380 - 3763253..3763810 (+) 558 WP_014479435.1 hypothetical protein -
  B9L64_RS19385 med 3763901..3764854 (+) 954 WP_003245494.1 transcriptional regulator Med Regulator
  B9L64_RS19390 comZ 3764869..3765060 (+) 192 WP_046380930.1 ComG operon transcriptional repressor ComZ Regulator
  B9L64_RS19395 yjzB 3765090..3765329 (-) 240 WP_003232972.1 spore coat protein YjzB -
  B9L64_RS19400 fabH 3765494..3766432 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  B9L64_RS19405 fabF 3766455..3767696 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  B9L64_RS19410 yjaZ 3767772..3768557 (+) 786 WP_003232967.1 DUF2268 domain-containing protein -
  B9L64_RS19415 appD 3768749..3769735 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35310.80 Da        Isoelectric Point: 4.5457

>NTDB_id=227121 B9L64_RS19385 WP_003245494.1 3763901..3764854(+) (med) [Bacillus subtilis strain 50-1]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=227121 B9L64_RS19385 WP_003245494.1 3763901..3764854(+) (med) [Bacillus subtilis strain 50-1]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGTTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment