Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   B9L64_RS17860 Genome accession   NZ_CP020915
Coordinates   3482665..3483459 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain 50-1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3477665..3488459
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B9L64_RS17830 sxzA 3478504..3479535 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  B9L64_RS17835 yfhB 3479650..3480531 (+) 882 WP_032723009.1 PhzF family phenazine biosynthesis isomerase -
  B9L64_RS17840 yfhC 3480619..3481203 (+) 585 WP_032723010.1 nitroreductase -
  B9L64_RS17845 yfhD 3481242..3481433 (-) 192 WP_003233561.1 YfhD family protein -
  B9L64_RS17850 yfhE 3481500..3481610 (-) 111 WP_003223230.1 YfhE family protein -
  B9L64_RS17855 yfhF 3481665..3482576 (-) 912 WP_033883295.1 TIGR01777 family oxidoreductase -
  B9L64_RS17860 recX 3482665..3483459 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  B9L64_RS17865 yfhH 3483461..3483775 (+) 315 WP_003244592.1 YfhH family protein -
  B9L64_RS17870 yfhI 3483918..3485111 (+) 1194 WP_003243500.1 MFS transporter -
  B9L64_RS17875 sspK 3485143..3485295 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  B9L64_RS17880 yfhJ 3485420..3485689 (+) 270 WP_015252516.1 YfhJ family protein -
  B9L64_RS17885 yfhK 3485834..3486352 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  B9L64_RS17890 spdL 3486437..3486769 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  B9L64_RS17895 ephM 3486756..3487616 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=227113 B9L64_RS17860 WP_029726844.1 3482665..3483459(+) (recX) [Bacillus subtilis strain 50-1]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=227113 B9L64_RS17860 WP_029726844.1 3482665..3483459(+) (recX) [Bacillus subtilis strain 50-1]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTTTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment