Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   B9L64_RS00080 Genome accession   NZ_CP020915
Coordinates   10391..10966 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain 50-1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 5391..15966
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B9L64_RS00050 dapD 5577..6287 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  B9L64_RS00055 dapI 6357..7481 (+) 1125 WP_032721474.1 N-acetyldiaminopimelate deacetylase -
  B9L64_RS00060 ykuS 7543..7788 (+) 246 WP_003232382.1 YkuS family protein -
  B9L64_RS00065 mscT 7825..8628 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  B9L64_RS00070 ahpA 8865..9407 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  B9L64_RS00075 ykuV 9479..9925 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  B9L64_RS00080 rok 10391..10966 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  B9L64_RS00085 cse15 11007..11972 (-) 966 WP_110109385.1 spore protein Cse15 -
  B9L64_RS00090 mobA 12109..12708 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  B9L64_RS00095 moeB 12759..13778 (+) 1020 WP_032721477.1 molybdopterin-synthase adenylyltransferase MoeB -
  B9L64_RS00100 glp 13796..15088 (+) 1293 WP_029317736.1 gephyrin-like molybdotransferase Glp -
  B9L64_RS00105 mobB 15049..15570 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=227048 B9L64_RS00080 WP_003232378.1 10391..10966(+) (rok) [Bacillus subtilis strain 50-1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=227048 B9L64_RS00080 WP_003232378.1 10391..10966(+) (rok) [Bacillus subtilis strain 50-1]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment