Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   MW_RS04705 Genome accession   NC_003923
Coordinates   965661..966647 (+) Length   328 a.a.
NCBI ID   WP_001067042.1    Uniprot ID   -
Organism   Staphylococcus aureus subsp. aureus MW2     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 960661..971647
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MW_RS04690 (MW0871) - 961068..962009 (+) 942 WP_000786736.1 ABC transporter ATP-binding protein -
  MW_RS04695 (MW0872) - 962028..963683 (+) 1656 WP_000197024.1 peptide ABC transporter substrate-binding protein -
  MW_RS04700 (MW0873) opp4A 963895..965610 (+) 1716 WP_000517176.1 oligopeptide ABC transporter substrate-binding protein -
  MW_RS04705 (MW0874) amiE 965661..966647 (+) 987 WP_001067042.1 ABC transporter ATP-binding protein Regulator
  MW_RS04710 (MW0875) - 966650..967630 (+) 981 WP_000427760.1 ABC transporter ATP-binding protein -
  MW_RS04715 (MW0876) opp4B 967623..968585 (+) 963 WP_000239820.1 oligopeptide ABC transporter permease -
  MW_RS04720 (MW0877) opp4C 968597..969478 (+) 882 WP_001180274.1 oligopeptide ABC transporter permease -
  MW_RS04725 (MW0878) trpS 969520..970509 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  MW_RS04730 (MW0879) spxA 970804..971199 (+) 396 WP_000258003.1 transcriptional regulator SpxA -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 37007.44 Da        Isoelectric Point: 8.1005

>NTDB_id=22694 MW_RS04705 WP_001067042.1 965661..966647(+) (amiE) [Staphylococcus aureus subsp. aureus MW2]
MNNVLLEVKDLETSLKINNEWLATVENISFELSKGEVLGIVGESGCGKSILSKSIIKLLPEKISKLSNGEVIFDGKRIDT
LNEKQLLDIRGNDIAMIFQEPMTALNPVFTIKNQLVESIKSHKKISKKEANNLAKDLLKKVGIARQDEILNSYPHQLSGG
MRQRVMIAMAISCSPKLLIADEPTTALDVTIQAQILDLLKELQKETQMAIMMITHDLSVVAEFCDKVLVMYAGQIVEFGG
IKEILHNPKHPYTQKLLSTIPKLKEEQKRLETIEGIVPSIQAFHVNKCRFANRCNKKMDICNNQSPKMHVCEDVIVRCHL
YKNEYKEI

Nucleotide


Download         Length: 987 bp        

>NTDB_id=22694 MW_RS04705 WP_001067042.1 965661..966647(+) (amiE) [Staphylococcus aureus subsp. aureus MW2]
ATGAATAATGTATTGTTAGAGGTTAAAGATTTAGAAACATCATTAAAAATAAATAATGAATGGTTAGCAACTGTTGAAAA
TATTTCTTTTGAATTATCTAAAGGAGAAGTTTTGGGTATAGTAGGGGAATCTGGTTGCGGTAAGTCCATATTAAGTAAGT
CAATTATTAAATTATTACCAGAAAAGATATCTAAACTAAGTAATGGAGAAGTTATATTTGATGGTAAACGAATCGATACG
CTCAATGAGAAGCAATTGCTAGATATTCGAGGAAATGATATTGCTATGATTTTTCAAGAACCTATGACTGCTTTAAATCC
TGTATTTACCATAAAAAATCAACTTGTGGAATCTATAAAATCACATAAAAAAATTTCTAAAAAAGAAGCAAATAACTTAG
CAAAAGATTTACTAAAAAAAGTTGGAATTGCTAGACAAGATGAAATATTAAATAGCTATCCTCATCAATTATCTGGTGGT
ATGAGACAAAGAGTAATGATTGCAATGGCCATTTCATGTTCTCCTAAATTATTAATTGCTGATGAACCTACAACAGCATT
GGATGTCACGATTCAAGCGCAAATATTAGACTTATTAAAAGAATTGCAAAAGGAAACGCAAATGGCAATTATGATGATTA
CACATGATTTGAGTGTAGTTGCTGAGTTTTGCGATAAAGTCTTAGTTATGTATGCAGGTCAAATTGTAGAATTTGGAGGC
ATAAAAGAAATACTACACAATCCGAAACATCCTTATACCCAAAAATTATTATCAACAATTCCAAAACTTAAAGAAGAGCA
GAAACGACTTGAAACGATAGAAGGAATTGTGCCATCAATCCAAGCATTTCACGTTAATAAGTGCAGATTTGCAAATAGAT
GTAACAAAAAAATGGATATTTGTAATAATCAATCTCCTAAAATGCATGTTTGTGAAGACGTCATTGTACGTTGTCATTTG
TACAAAAATGAATATAAGGAGATATAA

Domains

Predicted by InterProScan.

Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY)

(236-301)

ABC transporter (ABC_tran)

(26-184)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

44.551

95.122

0.424
  oppD Streptococcus mutans UA159

44.66

94.207

0.421
  amiE Streptococcus thermophilus LMG 18311

43.91

95.122

0.418
  amiE Streptococcus thermophilus LMD-9

43.91

95.122

0.418

Multiple sequence alignment