Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   B9C53_RS04395 Genome accession   NZ_CP020874
Coordinates   988884..989837 (-) Length   317 a.a.
NCBI ID   WP_007409125.1    Uniprot ID   A7Z3B8
Organism   Bacillus velezensis strain GYL4     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 983884..994837
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B9C53_RS04365 (B9C53_04330) - 984039..985025 (-) 987 WP_038457614.1 ABC transporter ATP-binding protein -
  B9C53_RS04370 (B9C53_04335) - 985199..985984 (-) 786 WP_029325951.1 DUF2268 domain-containing protein -
  B9C53_RS04375 (B9C53_04340) fabF 986067..987305 (-) 1239 WP_007610580.1 beta-ketoacyl-ACP synthase II -
  B9C53_RS04380 (B9C53_04345) - 987327..988265 (-) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  B9C53_RS04385 (B9C53_04350) - 988433..988651 (+) 219 WP_007610579.1 hypothetical protein -
  B9C53_RS04390 (B9C53_04355) comZ 988680..988871 (-) 192 WP_003155061.1 ComZ family protein Regulator
  B9C53_RS04395 (B9C53_04360) med 988884..989837 (-) 954 WP_007409125.1 BMP family ABC transporter substrate-binding protein Regulator
  B9C53_RS04400 (B9C53_04365) - 989927..990493 (-) 567 WP_038457612.1 hypothetical protein -
  B9C53_RS04405 (B9C53_04370) - 990576..991310 (-) 735 WP_038457610.1 hypothetical protein -
  B9C53_RS04415 (B9C53_04380) - 991571..991756 (+) 186 WP_007409129.1 YjzD family protein -
  B9C53_RS04420 (B9C53_04385) - 991793..991972 (-) 180 WP_003155070.1 YjzC family protein -
  B9C53_RS04425 (B9C53_04390) argF 992048..993019 (-) 972 WP_038457606.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35342.99 Da        Isoelectric Point: 4.6686

>NTDB_id=226753 B9C53_RS04395 WP_007409125.1 988884..989837(-) (med) [Bacillus velezensis strain GYL4]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=226753 B9C53_RS04395 WP_007409125.1 988884..989837(-) (med) [Bacillus velezensis strain GYL4]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCACCTTATGGGTGAAGCAA
TGGGCTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAACCCGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAAAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTGGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGAACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z3B8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.549

100

0.785

Multiple sequence alignment