Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   B8F96_RS10430 Genome accession   NZ_CP020853
Coordinates   2156463..2157059 (+) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain KPN528     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2151463..2162059
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B8F96_RS10405 (B8F96_10400) - 2151655..2153412 (-) 1758 WP_004179203.1 Lon protease family protein -
  B8F96_RS10410 (B8F96_10405) matP 2153598..2154050 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  B8F96_RS10415 (B8F96_10410) ompA 2154182..2155252 (-) 1071 WP_002898408.1 porin OmpA -
  B8F96_RS10420 (B8F96_10415) sulA 2155605..2156114 (-) 510 WP_004179215.1 SOS-induced cell division inhibitor SulA -
  B8F96_RS10430 (B8F96_10425) sxy/tfoX 2156463..2157059 (+) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  B8F96_RS10435 (B8F96_10430) yccS 2157073..2159208 (-) 2136 WP_002898422.1 YccS family putative transporter -
  B8F96_RS10440 (B8F96_10435) - 2159226..2159672 (-) 447 WP_002898425.1 YccF domain-containing protein -
  B8F96_RS10445 (B8F96_10440) helD 2159797..2161851 (+) 2055 WP_004179218.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=226515 B8F96_RS10430 WP_004179217.1 2156463..2157059(+) (sxy/tfoX) [Klebsiella pneumoniae strain KPN528]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=226515 B8F96_RS10430 WP_004179217.1 2156463..2157059(+) (sxy/tfoX) [Klebsiella pneumoniae strain KPN528]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCCACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment