Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   B7P19_RS07360 Genome accession   NZ_CP020817
Coordinates   1582638..1583264 (+) Length   208 a.a.
NCBI ID   WP_048979351.1    Uniprot ID   -
Organism   Enterobacter sp. Crenshaw     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1577638..1588264
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B7P19_RS07340 (B7P19_07425) - 1578038..1579798 (-) 1761 WP_048979352.1 Lon protease family protein -
  B7P19_RS07345 (B7P19_07430) matP 1579985..1580437 (+) 453 WP_032658161.1 macrodomain Ter protein MatP -
  B7P19_RS07350 (B7P19_07435) ompA 1580501..1581556 (-) 1056 WP_115504044.1 porin OmpA -
  B7P19_RS07355 (B7P19_07440) sulA 1581911..1582420 (-) 510 WP_033145120.1 SOS-induced cell division inhibitor SulA -
  B7P19_RS07360 (B7P19_07445) sxy/tfoX 1582638..1583264 (+) 627 WP_048979351.1 TfoX/Sxy family DNA transformation protein Regulator
  B7P19_RS07365 (B7P19_07450) yccS 1583221..1585383 (-) 2163 WP_039261616.1 YccS family putative transporter -
  B7P19_RS07370 (B7P19_07455) - 1585403..1585849 (-) 447 WP_023311032.1 YccF domain-containing protein -
  B7P19_RS07375 (B7P19_07460) helD 1585973..1588027 (+) 2055 WP_101744467.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23936.54 Da        Isoelectric Point: 9.4588

>NTDB_id=226068 B7P19_RS07360 WP_048979351.1 1582638..1583264(+) (sxy/tfoX) [Enterobacter sp. Crenshaw]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALGIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHFSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=226068 B7P19_RS07360 WP_048979351.1 1582638..1583264(+) (sxy/tfoX) [Enterobacter sp. Crenshaw]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCCCCGTTGGGCGAGATTCATCATCGCGCGCT
GTTTGGAGGCTATACCCTGGCGGTGGATGATGCGGTTTTTGCCATGGTGTCAGACGGAGAGCTTTATCTCCGCGCCTGTG
AGGAGAGTGCGAAATACTGTGTAAAAAATGCCTCCTCTTTTTTGACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGAGAGCGGCTGCTTCAGCTCTCCTCGTTTGCGCTCAGTGCGGCAAG
AAAAGAGCGCTATCAGCGCCATCAACGAAACCGACTTAAGGATCTGCCAAACCTGACGTTTCAGCTTGAAGTCTTGCTCT
TTGAAGCTGGCATTACCAATGAGGAAACGCTGCGGGCGCTGGGTGCCAGAGCGAGCTGGCTGAAGATGCGGGCAAAAAAC
AAAGCGCTCGGTATTAAGGTTCTCTTCGCACTGGAAGGGGCTATCGAGGGGCTGCATGAGGCGGCACTCCCGGCAGGCAT
TCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTTCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567

Multiple sequence alignment