Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   B7941_RS09695 Genome accession   NZ_CP020805
Coordinates   1878826..1879422 (+) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain 9D-6     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1873826..1884422
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B7941_RS09665 (B7941_09655) - 1874040..1874495 (+) 456 WP_085341952.1 flavodoxin -
  B7941_RS09670 (B7941_09660) dapD 1874577..1875287 (+) 711 WP_012117443.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  B7941_RS09675 (B7941_09665) - 1875358..1876482 (+) 1125 WP_085341953.1 N-acetyldiaminopimelate deacetylase -
  B7941_RS09680 (B7941_09670) - 1876543..1876788 (+) 246 WP_003154596.1 YkuS family protein -
  B7941_RS09685 (B7941_09675) - 1876822..1877628 (-) 807 WP_038463800.1 mechanosensitive ion channel family protein -
  B7941_RS09690 (B7941_09680) - 1877915..1878373 (+) 459 WP_015239765.1 TlpA disulfide reductase family protein -
  B7941_RS09695 (B7941_09685) rok 1878826..1879422 (+) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  B7941_RS09700 (B7941_09690) - 1879443..1880435 (-) 993 WP_085341954.1 sporulation protein -
  B7941_RS09705 (B7941_09695) - 1880581..1881183 (+) 603 WP_039251605.1 molybdenum cofactor guanylyltransferase -
  B7941_RS09710 (B7941_09700) - 1881235..1882254 (+) 1020 WP_007611113.1 molybdopterin-synthase adenylyltransferase MoeB -
  B7941_RS09715 (B7941_09705) glp 1882272..1883564 (+) 1293 WP_085341955.1 gephyrin-like molybdotransferase Glp -
  B7941_RS09720 (B7941_09710) mobB 1883525..1884046 (+) 522 WP_032868152.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=225948 B7941_RS09695 WP_003154591.1 1878826..1879422(+) (rok) [Bacillus velezensis strain 9D-6]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=225948 B7941_RS09695 WP_003154591.1 1878826..1879422(+) (rok) [Bacillus velezensis strain 9D-6]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATTAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843

Multiple sequence alignment