Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   B7941_RS09595 Genome accession   NZ_CP020805
Coordinates   1863005..1863469 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain 9D-6     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1858005..1868469
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B7941_RS09575 (B7941_09565) - 1858485..1860305 (+) 1821 WP_021493759.1 PAS domain-containing protein -
  B7941_RS09580 (B7941_09570) - 1860286..1861499 (-) 1214 Protein_1855 aminotransferase A -
  B7941_RS20020 - 1861700..1861861 (-) 162 WP_007409608.1 hypothetical protein -
  B7941_RS09590 (B7941_09580) cheV 1862050..1862961 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  B7941_RS09595 (B7941_09585) kre 1863005..1863469 (-) 465 WP_003154622.1 YkyB family protein Regulator
  B7941_RS09600 (B7941_09590) - 1863592..1864884 (-) 1293 WP_015239757.1 MFS transporter -
  B7941_RS09605 (B7941_09595) - 1864960..1865454 (-) 495 WP_088462390.1 L,D-transpeptidase family protein -
  B7941_RS09610 (B7941_09600) - 1865529..1866392 (-) 864 WP_085341949.1 metallophosphoesterase -
  B7941_RS09615 (B7941_09605) fadH 1866537..1867301 (+) 765 WP_015417368.1 2,4-dienoyl-CoA reductase -
  B7941_RS09620 (B7941_09610) - 1867466..1867917 (+) 452 Protein_1863 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=225947 B7941_RS09595 WP_003154622.1 1863005..1863469(-) (kre) [Bacillus velezensis strain 9D-6]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=225947 B7941_RS09595 WP_003154622.1 1863005..1863469(-) (kre) [Bacillus velezensis strain 9D-6]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAGTCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment