Detailed information NTG0225939

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: B7941_RS08340
• Genome accession: NZ_CP020805
• Coordinates: 1619924..1620877 (+)
• Length: 317 a.a.
• NCBI ID: WP_007409125.1
• Uniprot ID: A7Z3B8
• Organism: Bacillus velezensis strain 9D-6
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1614924..1625877

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B7941_RS08310 (B7941_08300)	argF	1616742..1617713 (+)	972	WP_085341881.1	ornithine carbamoyltransferase	-
B7941_RS08315 (B7941_08305)	-	1617789..1617968 (+)	180	WP_003155070.1	YjzC family protein	-
B7941_RS08320 (B7941_08310)	-	1618005..1618190 (-)	186	WP_007409129.1	YjzD family protein	-
B7941_RS08330 (B7941_08320)	-	1618451..1619185 (+)	735	WP_007409127.1	hypothetical protein	-
B7941_RS08335 (B7941_08325)	-	1619268..1619834 (+)	567	WP_007409126.1	hypothetical protein	-
B7941_RS08340 (B7941_08330)	med	1619924..1620877 (+)	954	WP_007409125.1	BMP family ABC transporter substrate-binding protein	Regulator
B7941_RS08345 (B7941_08335)	comZ	1620890..1621081 (+)	192	WP_007409124.1	ComZ family protein	Regulator
B7941_RS08350 (B7941_08340)	-	1621110..1621328 (-)	219	WP_007409123.1	hypothetical protein	-
B7941_RS08355 (B7941_08345)	-	1621495..1622433 (+)	939	WP_007409122.1	beta-ketoacyl-ACP synthase III	-
B7941_RS08360 (B7941_08350)	fabF	1622456..1623694 (+)	1239	WP_020955629.1	beta-ketoacyl-ACP synthase II	-
B7941_RS08365 (B7941_08355)	-	1623777..1624562 (+)	786	WP_053104214.1	DUF2268 domain-containing protein	-
B7941_RS08370 (B7941_08360)	-	1624736..1625722 (+)	987	WP_007409119.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35342.99 Da
• Isoelectric Point: 4.6686

>NTDB_id=225939 B7941_RS08340 WP_007409125.1 1619924..1620877(+) (med) [Bacillus velezensis strain 9D-6]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=225939 B7941_RS08340 WP_007409125.1 1619924..1620877(+) (med) [Bacillus velezensis strain 9D-6]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACTATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A7Z3B8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.549	100	0.785