Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   B7941_RS06880 Genome accession   NZ_CP020805
Coordinates   1354657..1355448 (+) Length   263 a.a.
NCBI ID   WP_085341838.1    Uniprot ID   -
Organism   Bacillus velezensis strain 9D-6     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1349657..1360448
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B7941_RS06855 (B7941_06850) - 1351651..1352535 (+) 885 WP_007408548.1 PhzF family phenazine biosynthesis isomerase -
  B7941_RS06860 (B7941_06855) - 1352612..1353196 (+) 585 WP_007408549.1 nitroreductase -
  B7941_RS06865 (B7941_06860) - 1353236..1353427 (-) 192 WP_003155508.1 YfhD family protein -
  B7941_RS06870 (B7941_06865) - 1353498..1353608 (-) 111 WP_003155504.1 YfhE family protein -
  B7941_RS06875 (B7941_06870) - 1353666..1354565 (-) 900 WP_085341837.1 TIGR01777 family oxidoreductase -
  B7941_RS06880 (B7941_06875) recX 1354657..1355448 (+) 792 WP_085341838.1 recombination regulator RecX Regulator
  B7941_RS06885 (B7941_06880) - 1355455..1355769 (+) 315 WP_007408553.1 YfhH family protein -
  B7941_RS06890 (B7941_06885) - 1355914..1357107 (+) 1194 WP_025284446.1 MFS transporter -
  B7941_RS06895 (B7941_06890) - 1357147..1357536 (-) 390 WP_043020687.1 DUF2606 family protein -
  B7941_RS06900 (B7941_06895) - 1357499..1358410 (-) 912 WP_015239429.1 trypsin-like serine peptidase -
  B7941_RS06905 (B7941_06900) - 1358557..1358709 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  B7941_RS06910 (B7941_06905) - 1358833..1359102 (+) 270 WP_003155492.1 YfhJ family protein -
  B7941_RS06915 (B7941_06910) - 1359235..1359762 (+) 528 WP_015417063.1 SH3 domain-containing protein -
  B7941_RS06920 (B7941_06915) - 1359848..1360183 (+) 336 WP_085341839.1 SdpI family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30946.17 Da        Isoelectric Point: 6.0902

>NTDB_id=225931 B7941_RS06880 WP_085341838.1 1354657..1355448(+) (recX) [Bacillus velezensis strain 9D-6]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELDELDILEIQYGDDVKKAFNRAVEFLSYRMRSEKEV
RDHLKKKETPDMVISEVIHKLYDYSYLNDKEFAEAYASTHKKINGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKAHAEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDNIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=225931 B7941_RS06880 WP_085341838.1 1354657..1355448(+) (recX) [Bacillus velezensis strain 9D-6]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAATACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTGCTTGTGCGTTTTGACCTGAAAAAAGGGAAAGAACTGGACGAGCTTGACATTCTTGAAATCC
AGTACGGCGATGACGTGAAAAAAGCCTTTAACCGCGCCGTAGAATTTTTATCATACCGGATGCGCTCTGAAAAAGAAGTC
CGGGATCATCTGAAGAAAAAAGAAACACCGGACATGGTCATTTCTGAAGTCATCCATAAACTGTACGATTACAGCTACTT
AAATGACAAAGAATTTGCCGAAGCCTATGCGAGCACCCACAAAAAAATAAACGGCAAAGGCCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGATACCATCAAGGAGACGCTCAGTGCGTTTACATTTGATGAGCAGATACAAGAA
GCGCTGAAACATATCGGCAAAATCCTGAAAAAAGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTCCCTTTTGACGTCATCAATGCCGCTCTGGAGCAGACGGAGTATGAAAATGATGATGAAGCCG
AGATGGAAGCTCTGAAGGCTCATGCGGAAAAAGCGATCAGGAAATACCGTTATGACGGCAGTTATGAAAGCGGAATGAAG
GTCAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACAATATTGATCAATTCTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

79.087

100

0.791

Multiple sequence alignment