Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | B0D73_RS05655 | Genome accession | NZ_CP020776 |
| Coordinates | 1017404..1017706 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain YH002 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1012404..1022706
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B0D73_RS05630 (B0D73_05625) | rpsR | 1012766..1013026 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| B0D73_RS05635 (B0D73_05630) | lon | 1013087..1015462 (-) | 2376 | WP_002858084.1 | endopeptidase La | - |
| B0D73_RS05640 (B0D73_05635) | - | 1015479..1016126 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| B0D73_RS05645 (B0D73_05640) | fliW | 1016287..1016676 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| B0D73_RS05650 (B0D73_05645) | proC | 1016676..1017407 (+) | 732 | WP_002858388.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| B0D73_RS05655 (B0D73_05650) | ctsT | 1017404..1017706 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| B0D73_RS05660 (B0D73_05655) | - | 1017703..1018365 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| B0D73_RS05665 (B0D73_05660) | - | 1018362..1018814 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| B0D73_RS05670 (B0D73_05665) | hemD | 1018811..1019440 (-) | 630 | WP_002858312.1 | uroporphyrinogen-III synthase | - |
| B0D73_RS05675 (B0D73_05670) | thiE | 1019418..1020050 (-) | 633 | WP_002858441.1 | thiamine phosphate synthase | - |
| B0D73_RS05680 (B0D73_05675) | thiD | 1020040..1020852 (-) | 813 | WP_002858043.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| B0D73_RS05685 (B0D73_05680) | - | 1020849..1021535 (-) | 687 | WP_002858132.1 | endonuclease III domain-containing protein | - |
| B0D73_RS05690 (B0D73_05685) | - | 1021532..1022293 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=225892 B0D73_RS05655 WP_002853046.1 1017404..1017706(+) (ctsT) [Campylobacter jejuni strain YH002]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=225892 B0D73_RS05655 WP_002853046.1 1017404..1017706(+) (ctsT) [Campylobacter jejuni strain YH002]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |