Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   B7492_RS21230 Genome accession   NZ_CP020743
Coordinates   4090995..4091453 (+) Length   152 a.a.
NCBI ID   WP_002014827.1    Uniprot ID   J8I023
Organism   Bacillus mycoides strain Gnyt1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 4085995..4096453
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B7492_RS21215 (B7492_21195) - 4086659..4086895 (+) 237 WP_002014830.1 hypothetical protein -
  B7492_RS21220 (B7492_21200) - 4087062..4089170 (-) 2109 WP_002014829.1 polyphosphate kinase -
  B7492_RS21225 (B7492_21205) - 4089279..4090853 (-) 1575 WP_085312261.1 Ppx/GppA family phosphatase -
  B7492_RS21230 (B7492_21210) kre 4090995..4091453 (+) 459 WP_002014827.1 YkyB family protein Regulator
  B7492_RS21235 (B7492_21215) - 4091486..4092148 (-) 663 WP_085312262.1 YkyA family protein -
  B7492_RS21240 (B7492_21220) - 4092702..4093355 (-) 654 WP_002033822.1 diguanylate cyclase domain-containing protein -
  B7492_RS21245 (B7492_21225) - 4093518..4093751 (+) 234 WP_002014824.1 phage holin -
  B7492_RS21250 (B7492_21230) - 4093783..4094283 (-) 501 WP_002033821.1 hypothetical protein -
  B7492_RS21255 (B7492_21235) - 4094836..4096377 (+) 1542 WP_085312263.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17753.46 Da        Isoelectric Point: 10.6793

>NTDB_id=225686 B7492_RS21230 WP_002014827.1 4090995..4091453(+) (kre) [Bacillus mycoides strain Gnyt1]
MKPSQPQSPLHNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKDDFRTLPHLGHLESSYRNPKTTLSLTIAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=225686 B7492_RS21230 WP_002014827.1 4090995..4091453(+) (kre) [Bacillus mycoides strain Gnyt1]
ATGAAACCTTCACAACCACAATCTCCATTGCATAATCAACATTCTATTAATAGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAACCCTAAGTACTTATATTGGTTAAAAAAGACTGCTTTAGAACGCTTAATTACTGAAA
AAAAGGCTATCAAAGAAGGATTACATTTTTCTAGAAATCCACGTTTTAGTCAACAACAATCCGATGTTCTTATACGTTTA
GGTGATTATTTTTTCCATATCCCTCCTACGAAAGATGATTTTCGCACCCTACCGCATCTTGGTCACCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAATAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTAAAAC
AGGAGAAAAAATTAAGCGAACCAGTTCCATGGTATAGCCGTACCTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB J8I023

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

63.793

76.316

0.487

Multiple sequence alignment