Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | B7492_RS10600 | Genome accession | NZ_CP020743 |
| Coordinates | 2026297..2026584 (+) | Length | 95 a.a. |
| NCBI ID | WP_002012401.1 | Uniprot ID | A0A366G1Y4 |
| Organism | Bacillus mycoides strain Gnyt1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2021297..2031584
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B7492_RS10580 (B7492_10575) | - | 2022480..2022677 (+) | 198 | WP_085310559.1 | DUF4083 domain-containing protein | - |
| B7492_RS10585 (B7492_10580) | - | 2022708..2023169 (+) | 462 | WP_002135797.1 | NUDIX hydrolase | - |
| B7492_RS10590 (B7492_10585) | nadE | 2023214..2024032 (-) | 819 | WP_002064947.1 | ammonia-dependent NAD(+) synthetase | - |
| B7492_RS10595 (B7492_10590) | - | 2024297..2026177 (+) | 1881 | WP_085310561.1 | FtsX-like permease family protein | - |
| B7492_RS10600 (B7492_10595) | abrB | 2026297..2026584 (+) | 288 | WP_002012401.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| B7492_RS10605 (B7492_10600) | - | 2026920..2027870 (+) | 951 | WP_085310562.1 | serine protease | - |
| B7492_RS10610 (B7492_10605) | - | 2027911..2028219 (-) | 309 | WP_001259916.1 | helix-turn-helix transcriptional regulator | - |
| B7492_RS10615 (B7492_10610) | - | 2028327..2029262 (+) | 936 | WP_085310564.1 | aldo/keto reductase | - |
| B7492_RS10620 (B7492_10615) | - | 2029312..2029515 (+) | 204 | WP_002012406.1 | hypothetical protein | - |
| B7492_RS10625 (B7492_10620) | - | 2029546..2029770 (-) | 225 | WP_002064959.1 | hypothetical protein | - |
| B7492_RS10630 (B7492_10625) | - | 2029855..2030202 (-) | 348 | WP_000426320.1 | DUF4257 domain-containing protein | - |
| B7492_RS10635 (B7492_10630) | - | 2030399..2030933 (+) | 535 | Protein_2024 | DinB family protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10647.42 Da Isoelectric Point: 6.9795
>NTDB_id=225679 B7492_RS10600 WP_002012401.1 2026297..2026584(+) (abrB) [Bacillus mycoides strain Gnyt1]
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
Nucleotide
Download Length: 288 bp
>NTDB_id=225679 B7492_RS10600 WP_002012401.1 2026297..2026584(+) (abrB) [Bacillus mycoides strain Gnyt1]
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGGGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAGCCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGATCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGTGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGGGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAGCCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGATCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGTGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.383 |
98.947 |
0.558 |