Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | B7492_RS00220 | Genome accession | NZ_CP020743 |
| Coordinates | 40590..40874 (-) | Length | 94 a.a. |
| NCBI ID | WP_002063374.1 | Uniprot ID | J9BXR7 |
| Organism | Bacillus mycoides strain Gnyt1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 35590..45874
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B7492_RS00185 (B7492_00185) | tmk | 35744..36370 (+) | 627 | WP_002009634.1 | dTMP kinase | - |
| B7492_RS00190 (B7492_00190) | holB | 36406..37389 (+) | 984 | WP_002009636.1 | DNA polymerase III subunit delta' | - |
| B7492_RS00195 (B7492_00195) | - | 37395..38222 (+) | 828 | WP_002009637.1 | stage 0 sporulation family protein | - |
| B7492_RS00200 (B7492_00200) | yabA | 38237..38587 (+) | 351 | WP_002009639.1 | DNA replication initiation control protein YabA | - |
| B7492_RS00205 (B7492_00205) | - | 38708..39448 (+) | 741 | WP_002029328.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| B7492_RS00210 (B7492_00210) | - | 39435..39725 (+) | 291 | WP_002130207.1 | GIY-YIG nuclease family protein | - |
| B7492_RS00215 (B7492_00215) | rsmI | 39694..40569 (+) | 876 | WP_002138891.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| B7492_RS00220 (B7492_00220) | abrB | 40590..40874 (-) | 285 | WP_002063374.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| B7492_RS00225 (B7492_00225) | metG | 41369..43378 (+) | 2010 | WP_085308552.1 | methionine--tRNA ligase | - |
| B7492_RS00230 (B7492_00230) | - | 43544..44311 (+) | 768 | WP_085308555.1 | TatD family hydrolase | - |
| B7492_RS00235 (B7492_00235) | rnmV | 44572..45129 (+) | 558 | WP_002029323.1 | ribonuclease M5 | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10490.17 Da Isoelectric Point: 4.7283
>NTDB_id=225660 B7492_RS00220 WP_002063374.1 40590..40874(-) (abrB) [Bacillus mycoides strain Gnyt1]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDEEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDEEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=225660 B7492_RS00220 WP_002063374.1 40590..40874(-) (abrB) [Bacillus mycoides strain Gnyt1]
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGCACTTTAGG
TATTGCAGAAAAGGACGCTCTTGAAATCTACGTTGATGAAGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGCAAAGAAGGCGCTGAA
CAAGTCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAGTAA
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGCACTTTAGG
TATTGCAGAAAAGGACGCTCTTGAAATCTACGTTGATGAAGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGCAAAGAAGGCGCTGAA
CAAGTCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
82.979 |
100 |
0.83 |